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Information for unigene UN17671
| FASTA Sequence |
| Unigene ID: UN17671 | Length: 1252 |
| SNP | GGGAGTTTGTTTCTCTGGATAGATCAAACATGGCAACGGTACCTTCCTTCACCCAATTTCCCTGCAAAACCCTAATCTCAAGCCCT
TCAAACTCTAAACATCAATCTAAATCTCCTCTTCTATTGCCCATTAGTCTGTTCAATCGGCGACCTCAGGTTGGAATCGCTGTTCA
TCGGTCAGATTTCAAGGTCCGAGCCAGTGACGTCAATGACGAGTGGGGTCCGGATTCCAAGGGCCGAGGCGGTGACGTTGAAGACG
AGTGGGGTCCCGAGAGAGGAACGAACTCATCGGTGGGGGAGAAAGAAGCAGAGGAAGCCATCGAATCTGCGGAGGAGACGGAGCGG
CTTAAGAGAGTGCTAGCCGGTTCTTTGTATGGAATAGATCGAGGTTTAAACGCGTCGAGTGAGACGAGAGCGGAGATCAGTGAGCT
GATAACGCAGCTGGAGGGGAATAACCCTAACCCAGCTCCTAACGAAGCTCTGTTTCTCCTCAACGGCAAATGGATTCTCGCCTATA
CATCGTTTGTTGGTCTGTTCCCGTTGCTCTCACGCAGAATCTCACCGTTGGTTAAAGTGGATGAGATCTCACAAACCATTGATTCC
GACAGCTTCACCGTACACAACTCTGTCCGGTTCGCTGGTCCACTTGCCACAACATCGCTTAGCACCAACGCTAAATTCGAAGTCCG
AAGTCCTAAACGCGTCCAGGTCAAGTTTGAGCAAGGCATTATCGGGACTCCACAACTAACGGATTCGATTGAAATCCCGGAGTTCG
TCGAGGTTCTTGGTCAAAAAATCGACCTCAACCCCATCAGAGGGTTACTTACATCTGTCCAAGACACGGCTTTTTCAGTGGCAAGA
ACTATTTCAAGCCAGCCACCGTTGAAATTCTCTTTGCCTGGAGACAGTGCACAGTCATGGCTGCTCACCACTTATCTCGACAAAGA
CCTTCGGATCTCTAGAGGCGATGGTGGAAGCGTCTTTGTGCTCATCAGAGAGGGAAGCTCTCTCTTAAGCCCTTAAGTCATCTTTA
CTCACTCATCACATCCGTACAGTAACATATATAGAACCATAAGTCTGTGTTTCAAGTGTTGTAACTGTTATGTACTTTACTACATA
GTTGGGAGTTATAAATGTAATTAATTATATACATACGTAACTGAACCGTCCGGTTAAGGGTTTTGCTATACCGACAGTAAGCATTG
ATTCAGATGTGGTAAAGTTGGAAATTGAAATGGTCGGTTTGCATAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q94FZ9 RecName: Full=Plastid lipid-associated protein 1, chloroplastic; Flags: Precursor | 1463 | 8e-160 |
| AAK57561 plastid-lipid associated protein PAP1 [Brassica rapa subsp. campestris] | 1459 | 2e-159 |
| XP_002872677 plastid lipid-associated protein 1, chloroplast precursor [Arabidopsis lyrata subsp. lyrata] | 1270 | 2e-137 |
| AAD03693 fibrillin [Brassica napus] | 1126 | 9e-121 |
| BAJ33603 unnamed protein product [Thellungiella halophila] | 1099 | 1e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94FZ9 Plastid lipid-associated protein 1, chloroplastic | 1468 | 9e-162 |
| O81439 Probable plastid-lipid-associated protein 1, chloroplastic | 1094 | 2e-118 |
| Q94KU6 Plastid lipid-associated protein 2, chloroplastic | 1055 | 7e-114 |
| O49629 Probable plastid-lipid-associated protein 2, chloroplastic | 1037 | 8e-112 |
| P80471 Light-induced protein, chloroplastic | 952 | 6e-102 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZSZ9 Fibrillin (Fragment) | 1126 | 6e-121 |
| B9N8G9 Predicted protein | 966 | 2e-102 |
| A9PJU9 Putative uncharacterized protein | 963 | 5e-102 |
| A5AKB1 Putative uncharacterized protein | 950 | 2e-100 |
| Q0ZPA3 Plastid lipid associated protein CHRC | 935 | 9e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G04020.1 FIB (FIBRILLIN); structural molecule | 1095 | 1e-119 |
| AT4G22240.1 plastid-lipid associated protein PAP, putative | 1038 | 6e-113 |
| AT2G35490.1 plastid-lipid associated protein PAP, putative | 619 | 2e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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