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Information for unigene UN17680

FASTA Sequence
Unigene ID: UN17680Length: 892  SNP
GGAAAGAAGAAACCACTCTCTTTGCAGAAACAAGACCAACTTACTCTTGAATTCTCCTCTCCATCAGCTAACTAACAAGAAGCAGA
AGGTTTTGTGGGATCTAATGGCGAAGATCAAGCCGCAAGCTCTATTGCAGCAAAGCAAGAAGAAGAAAGGACCTTCTCCTATTAGC
ATAACCAGCATCGTGATTTACACCTTGGCCCTGCTTTTGGTCGTCTTCGTCCTCTTCTCCGCCTACAAACGTTGGACCCTCAGATC
TGAGATCCCAACCCACAATGGTAGATCACTTCTTCAGGATTCAGCCAAGACTAGTAATGTCCCATGGTTTGCTACCTTAGATACGG
GCAAAGGTTCAGTGACCATTGAACTGTTCAAAGATGCTGCTCCCAACGTTGTTGACGAATTCATCAACTTATGTCAAGATGGGTAT
TTCAAAGGTTTCTTATTCAGCAGAGTTGTGAAACATTCTGTCATTCAAGCTGGTCACTCTGCTGAGTCCGATGCTGTCACTGATTG
GGCTCTCCAAAAGACTAATCTTCATACCAGTTTAAAACAAGAAGAATTCATGGTGGGAACTCCTAAAGCTAAAAACCAGGAAGGAG
GGTTTCAGTTTTTCATTGTATCTTCTCAGATCACAGATCTGAACGAGAAATTGACAGTTTTTGGTCGTGTTGCAAAGGGACAAGAT
GTGGTTCAGAGATCGAGGAGGTTGAGACAGATGAACATCATCAACCAAAAGCACCTATAGAGATCATGTCCGTCACTTTGCTTCAG
ACATGTGAAAGCATTATTACTTATATTAAAAAATACTCCAAATGATTCTTGATGTATTAATGCTTTGTAACTTGAATTCTTTTTTC
TATCACCTCATTTGCAACTTTGTGGTAACACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182254 Peptidyl-prolyl cis-trans isomerase CYP21-3 [Arabidopsis thaliana]8238e-086
XP_002880294 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata]8075e-084
BAH57112 AT2G47320 [Arabidopsis thaliana]5461e-053
ACU17734 unknown [Glycine max]5218e-051
ACJ84137 unknown [Medicago truncatula]5137e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q94A16 Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial8233e-087
Q29RZ2 Peptidylprolyl isomerase domain and WD repeat-containing protein 11584e-010
Q8CEC6 Peptidylprolyl isomerase domain and WD repeat-containing protein 11584e-010
P0C1J0 Peptidyl-prolyl cis-trans isomerase cyp151541e-009
Q96BP3 Peptidylprolyl isomerase domain and WD repeat-containing protein 11532e-009

TrEMBL top hits (Blast detail)Scoree value
C0Z333 AT2G47320 protein5467e-054
C6T7D2 Putative uncharacterized protein5215e-051
B7FHA8 Putative uncharacterized protein5135e-050
B9HIP0 Predicted protein4858e-047
Q9C835 Putative uncharacterized protein At3g666544704e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G47320.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein8233e-088
AT3G66654.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein4703e-047
AT3G66654.3 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein4703e-047
AT3G66654.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein4703e-047
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase1745e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  20%
 
64  40%
 
102  20%
 
92  20%

Unigene MembersMember information