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Information for unigene UN17688

FASTA Sequence
Unigene ID: UN17688Length: 934 SSRSNP
GTCCTCTATATATAAACCATCTTAGATGCTTCACCATCACACACAACACTTAACACTTTTAATCACAAATCACCCACTGGTCTCTC
TCATACCTATCTAACAAAATGGGTTCTTCTTCTACACCTCAAGAAGAGCCTCAACTAGTAGATTCATCTGCCATTGTTCCTTCTCC
GTTAGCTCAGGAACCGGACAACGATGTACCTGCGCCGGGAAACCAGTTTGCTGAGTTCGCCGCCGGTTGTTTCTGGGGGGTGGAGC
TTGCTTTCCAGAGGATCCCTGGTGTGACAGAGACTGAGGTTGGGTACACTCAGGGGATCTCTCACAATCCTTCTTACAAGGATGTC
TGCACCAACACAACGAACCATGCAGAGGTTGTAAGGGTCCAGTATGATCCCAATGAGTGCACCTATGAGACTCTGCTTGATTTGTT
CTGGTCTAGGCATGATCCCACCACCTTGAATCGTCAGGGAAAACTTGTGGGAGCTCAGTACAGATCAGGTATATACTTCTACACAC
CAGAGCAAGAGAAGCTAGCACGTGAATCTCTGGAGACTCAGCAGAAGAAACTAGAGAAGAAGATTGTGACTGAGATATTACCGGCC
AAGAAATTCTACAAAGCTGAGGAATACCATCAGCATTACCTCTCTAAAGGTGGGACGAGTGGCCATGCACAGTCCCCTGCAAAGAG
CTGTAAAGACCCTATCAGCTGCTTTGGCTAAGGAAAAGCCTTTGTTCCTCTTTACCCAAAACAGAGGATTCTCTGAGGTTCTGTAT
CTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGATTTTTAAGTCTCAGTTAGTAATAAAGATGCATGTGGGATCATCTCAACTGTGTA
AGTGTAACTTGTCTTAGTTTCTAAACTTTGAACTGATGTTTGTTTGAATAATTAGTAAGTACCATCGTTATAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAR13689 peptide methionine sulfoxide reductase [Brassica oleracea]10576e-113
AAR15471 peptide methionine sulfoxide reductase [Olimarabidopsis pumila]9492e-100
AAR15485 peptide methionine sulfoxide reductase [Arabidopsis arenosa]9483e-100
NP_196363 peptide methionine sulfoxide reductase A2 [Arabidopsis thaliana]9464e-100
XP_002873309 peptide methionine sulfoxide reductase [Arabidopsis lyrata subsp. lyrata]9277e-098

Swiss-Prot top hits (Blast detail)Scoree value
Q9LY15 Peptide methionine sulfoxide reductase A29462e-101
Q9LY14 Peptide methionine sulfoxide reductase A37859e-083
Q9FKF7 Peptide methionine sulfoxide reductase A17751e-081
P54150 Peptide methionine sulfoxide reductase A4, chloroplastic7491e-078
Q9SEC2 Peptide methionine sulfoxide reductase7445e-078

TrEMBL top hits (Blast detail)Scoree value
Q6V5K8 Peptide methionine sulfoxide reductase10574e-113
Q6V5E6 Peptide methionine sulfoxide reductase9491e-100
Q6V5D2 Peptide methionine sulfoxide reductase9482e-100
Q6V5E5 Peptide methionine sulfoxide reductase8003e-083
C6TDT0 Putative uncharacterized protein7984e-083

Arabidopsis top hits (Blast detail)Scoree value
AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase9471e-102
AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase7866e-084
AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase7769e-083
AT4G25130.1 peptide methionine sulfoxide reductase, putative7509e-080
AT2G18030.1 peptide methionine sulfoxide reductase family protein2615e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  40%
 
115  33%
 
62  13%
 
122  13%

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