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Information for unigene UN17688
FASTA Sequence |
Unigene ID: UN17688 | Length: 934 |
SSR | SNP | GTCCTCTATATATAAACCATCTTAGATGCTTCACCATCACACACAACACTTAACACTTTTAATCACAAATCACCCACTGGTCTCTC
TCATACCTATCTAACAAAATGGGTTCTTCTTCTACACCTCAAGAAGAGCCTCAACTAGTAGATTCATCTGCCATTGTTCCTTCTCC
GTTAGCTCAGGAACCGGACAACGATGTACCTGCGCCGGGAAACCAGTTTGCTGAGTTCGCCGCCGGTTGTTTCTGGGGGGTGGAGC
TTGCTTTCCAGAGGATCCCTGGTGTGACAGAGACTGAGGTTGGGTACACTCAGGGGATCTCTCACAATCCTTCTTACAAGGATGTC
TGCACCAACACAACGAACCATGCAGAGGTTGTAAGGGTCCAGTATGATCCCAATGAGTGCACCTATGAGACTCTGCTTGATTTGTT
CTGGTCTAGGCATGATCCCACCACCTTGAATCGTCAGGGAAAACTTGTGGGAGCTCAGTACAGATCAGGTATATACTTCTACACAC
CAGAGCAAGAGAAGCTAGCACGTGAATCTCTGGAGACTCAGCAGAAGAAACTAGAGAAGAAGATTGTGACTGAGATATTACCGGCC
AAGAAATTCTACAAAGCTGAGGAATACCATCAGCATTACCTCTCTAAAGGTGGGACGAGTGGCCATGCACAGTCCCCTGCAAAGAG
CTGTAAAGACCCTATCAGCTGCTTTGGCTAAGGAAAAGCCTTTGTTCCTCTTTACCCAAAACAGAGGATTCTCTGAGGTTCTGTAT
CTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGATTTTTAAGTCTCAGTTAGTAATAAAGATGCATGTGGGATCATCTCAACTGTGTA
AGTGTAACTTGTCTTAGTTTCTAAACTTTGAACTGATGTTTGTTTGAATAATTAGTAAGTACCATCGTTATAAC
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GenBank top hits (Blast detail) | Score | e value |
AAR13689 peptide methionine sulfoxide reductase [Brassica oleracea] | 1057 | 6e-113 |
AAR15471 peptide methionine sulfoxide reductase [Olimarabidopsis pumila] | 949 | 2e-100 |
AAR15485 peptide methionine sulfoxide reductase [Arabidopsis arenosa] | 948 | 3e-100 |
NP_196363 peptide methionine sulfoxide reductase A2 [Arabidopsis thaliana] | 946 | 4e-100 |
XP_002873309 peptide methionine sulfoxide reductase [Arabidopsis lyrata subsp. lyrata] | 927 | 7e-098 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LY15 Peptide methionine sulfoxide reductase A2 | 946 | 2e-101 |
Q9LY14 Peptide methionine sulfoxide reductase A3 | 785 | 9e-083 |
Q9FKF7 Peptide methionine sulfoxide reductase A1 | 775 | 1e-081 |
P54150 Peptide methionine sulfoxide reductase A4, chloroplastic | 749 | 1e-078 |
Q9SEC2 Peptide methionine sulfoxide reductase | 744 | 5e-078 |
TrEMBL top hits (Blast detail) | Score | e value |
Q6V5K8 Peptide methionine sulfoxide reductase | 1057 | 4e-113 |
Q6V5E6 Peptide methionine sulfoxide reductase | 949 | 1e-100 |
Q6V5D2 Peptide methionine sulfoxide reductase | 948 | 2e-100 |
Q6V5E5 Peptide methionine sulfoxide reductase | 800 | 3e-083 |
C6TDT0 Putative uncharacterized protein | 798 | 4e-083 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 947 | 1e-102 |
AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 786 | 6e-084 |
AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 776 | 9e-083 |
AT4G25130.1 peptide methionine sulfoxide reductase, putative | 750 | 9e-080 |
AT2G18030.1 peptide methionine sulfoxide reductase family protein | 261 | 5e-023 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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