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Information for unigene UN17709

FASTA Sequence
Unigene ID: UN17709Length: 1875  SNP
GGGCCGCCAAGGACCGAGCTTCGTCTTCAGGTTCCTCGAGAAAGAACAGTTCGAGCCGACGACGAACAGAACCTACGGTTCTATCT
TGAGTAACCTGACTTTTGTAAAGACGTTTGCTTCAGGGATCATTGTCCCCAAGTCTTACGTGTTGCCACTCGATGACAAGCAGTAC
TTGCTTCCCGCCACATCTTTGGTTCAAGATGCACACTGAGCAGGGCTTGAAGTGTTTGTGTCAGGGTTTGCAAATGATGTCGATAT
CGCACACGACTACAGTTTTGATCCGGTCTCTGAGTATCTGTCTTTTATGGACTATGGCAACTTCTCTGTCGATGGTGTGCTCTCTG
ACTTTCCCATAACTGCATCTGCATCCATCGAATGCTTCTCCCACGTGGCCAGAAACGCAACAAAACAAGTGGATTTTCTTGTGATA
TCAAAAAACGGTGCGAGTGGAGACTATCCAGGATGTACAAACTTGGCATACGAGAAGGCAATCAACGATGGTGCTGATGTCATCGA
CTGCTCGGTCCAAATGTCCAGCGACGGTAAACCTTTTTGTTTAAGTTCTATCGATCTCGGGAACACCACGACGGTCGCTCAATCTC
CTCTCAGAAACCGTTCTACAAGTGTTCCTGAGTTTAGCTCAGTTAATGGAATATATACTTTTAGTCTCACATGGCCTGAGATCCAG
ACCTTGACTCCTGCTATTTCAAACCCCTACAGCAGTCTATACCAGATATTTAGGAATCCAAACGAGAGAAACTCTGGCAAGTTTCT
TTCGCTTTCTGAGTTCCTGAACTTGGCAAAGAACTCCACCACTCTCTCCGGTGTTTTGATCAGTGTTGAGAATGCAGCATACCTGA
GAGAGAAGCAAGGGCTCGACGTGGTCAAAGCGGTTCTTGATGCACTCACAGAGACTGGTTACAGCAATAGAACAACCACAAAGGTC
ATGATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCAAGTACGAGACTGTGTACAAAGTTGAAGAAACCAT
CCGTGATATTCTCGACTCTGCTATCGAAGACATTAAGAAGTTCGCTAATGCTGTTGTCCTTGTGAAAAAATCAGTCTTTCCGGTCG
TTGGTGGGTTCGTCACAGGGCAAACAAATGTGGTGGAGAGGCTACAGAAGTCTCGGCTCCCAGTTTACGTGGAGCTGTTCCAGAAT
GAGTTTATATCTCAACCGTATGACTTCTTCTCTGACGCAACTGTTGAGATAAACTCGTATGTCACTGGACCCGGTATAAATGGAAC
CATCACCGAGTTCCCATTCACAGCTGCAAGATACAGAAGGAATATATGTTTGGCCAGCAAAGAAACGCTACCTTACATGGCCCCTG
TCCAACCCGGTGGCCTCTTACAAGTTGTGAATCCTGCGGCCTTGCCTCCAGCTCAAGCTCCAAACCCTGTATTCACAGATGCTGAT
GTCACTGAGCCACCACTACCTCCGGTTACAGCAAAAGCCCCAACCGCAACTCCTGGAACACCATCAACCACTGCACCGCCACCTAG
TGGACAAACCAGACTCGCTCTATCTCTTCTCCTTTCTGTTTTTGCAATGGTTTTTGCCTCTCTTCTACTTATGTGATCACATCTTC
TCGCTGTTGATAATGTCTTTTCCTGGGCGTGACTCAGTCAATATCTTAACAGCCGGAACCGTAAATTCTTTTCCTGTTTATATTCT
TAGTTCTGTCCAAAAGAACAGGAGATTCTTGGAGTGTTGTAACTTTTCCGCATATTCATTTGTTGTTGTAACATAATACTCTTGCA
TTGTGTCTTGTACTATTTATGAGATTGTATCTATTCTTAAAGACGTAGTAATCAATTTCGTATTCCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867546 MRH5/SHV3 [Arabidopsis lyrata subsp. lyrata]23483e-262
AAL07129 unknown protein [Arabidopsis thaliana]23091e-257
NP_567755 putative glycerophosphoryl diester phosphodiesterase 2 [Arabidopsis thaliana]23091e-257
CAB36515 putative protein [Arabidopsis thaliana]23091e-257
NP_176869 putative glycerophosphoryl diester phosphodiesterase 3 [Arabidopsis thaliana]21639e-241

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZ11 Probable glycerophosphoryl diester phosphodiesterase 223094e-259
Q7Y208 Probable glycerophosphoryl diester phosphodiesterase 321634e-242
Q9FJ62 Probable glycerophosphoryl diester phosphodiesterase 121151e-236

TrEMBL top hits (Blast detail)Scoree value
B9SSQ8 Glycerophosphoryl diester phosphodiesterase, putative16663e-183
B9GJW4 Predicted protein16465e-181
B9GJW2 Predicted protein (Fragment)16072e-176
Q2WGN6 Glycerophosphodiesterase-like protein15954e-175
Q7XR26 OSJNBb0022F23.4 protein13851e-150

Arabidopsis top hits (Blast detail)Scoree value
AT4G26690.1 SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase23103e-260
AT1G66970.1 SVL2 (SHV3-LIKE 2); glycerophosphodiester phosphodiesterase/ kinase21671e-243
AT5G55480.1 SVL1 (SHV3-LIKE 1); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase21169e-238
AT1G66980.1 protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein19771e-221
AT5G58050.1 SVL4 (SHV3-LIKE 4); glycerophosphodiester phosphodiesterase/ kinase12961e-142

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  31%
 
63  23%
 
115  38%
 
101  8%

Unigene MembersMember information