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Information for unigene UN17716

FASTA Sequence
Unigene ID: UN17716Length: 1359  SNP
AGATTAAAGTCTTATGTAATATATTATACTTGAACATGGTACAATACAACTAGCTTTTTGTTTCTTTTTGCCTATAAACATAACTT
TATGTATGAGCTACATAAAGCATTTTATTGTTACTAGTAAGGGGTACGTACATTCACAGAGTTACAAAGATGCTCTCAACTCTCAA
ACTTCTGCCTCAGAAGAAGTCTCCAAGAACTGGATTAGCTTCGAGCGTTCATCCTCCAAAAGCTCAGGGTCCTCCTTTGTTAATCT
CTCCCGAGTTGCACCATCAACGCTCGTTGGATCATACACCACTTTTGCGTAATTATTGGTATGACCATCTTTGTTAGGTCCTGTAA
ACGGCTCGAGCTCATTGTGTCTCCATTCCCCATCTATGATATATTTATATTCAAACTGTCCCTCAGGCAATTCTCTCTTCAGGCTC
CAGAATCCTGTTCCCTTGTCCAGTGTCAGAGGTATCCTCTGTCCCCATCCGATGTCAAGGCCAGAAATTTCTACAGTGGAGAAACC
CTTGTCTTTCAGTGTCAGAGTAACATACTTCTTCTTGAGTCCTGTAAGAATATCAATTGTTGCATTTCTGATAGCATCCAGCTTCG
GGAAGCACGTTCGTTTGCTCATAAGTATTTTATGAGCATCCATAAGTTTATAGCCTTGCACCCAGAACATGTCAACGCAACAGCAG
GAGCCCTTCCCATACCAGCAGTGCAGTGGACGTATGTAACTCCTCCATTTCGCTTAACAGCTTTGTACAGTGTACTAAGCACAGCA
GGAAGACGCATTCTCAGATCAAATGCATCGAAGTCTCTTATTTCACAGCGAATATGCTCAATATCAGTAAATGTCTTAGCATATGC
TTGAATGCTGCTTATATCTACTCCAAAATATTCCAAGTCAGGATCTTGTTGCAAGCAGAATATGGTTTTAACACCAATCTTACGGA
GCTTGTCAACATCTTCAGGAGTCTGTAAGCAAGATCCAACGATTAAATCTGGACGAAGGAAGTTGTAGTTCATTCCTAGCTCGTGC
CTGTATGTTAATACAGCACCCATAGCTTGAGTCATGTCTTGGCTATATTCATCAGATTTCTCTTCCTCCTTCTTTGAAACACCACT
CATCTCTGCGCTGTCTGATACAGCCTGTAATACAAGTCGACATTTAGGATCATTGGCTTTGATTGGTAGCATCATCTTCAAGGAAG
ACCAAGAAGGATCTCTGTGATTGCCTCCAAAGCTCAACAGAGGTGAGACTGAAGATCTAGGAAGATTCTGAAGGCAATTCATCTCT
TAGAGAATGTATCAGATATGAAGAATTGCTCACTCACTCAGTCCCAGGTCCGTCGATAAAAGATCTGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877847 starch-excess 4 [Arabidopsis lyrata subsp. lyrata]9038e-095
NP_566960 dual specificity protein phosphatase (DsPTP1) family protein [Arabidopsis thaliana]8956e-094
NP_001030842 dual specificity protein phosphatase (DsPTP1) family protein [Arabidopsis thaliana]8956e-094
CAB41338 putative protein [Arabidopsis thaliana]8956e-094
AAL27495 AT3g52180/F4F15_290 [Arabidopsis thaliana]8902e-093

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q2V2S0 Putative uncharacterized protein At3g52180.28954e-094
Q9FEB5 PTPKIS18954e-094
Q9SUY7 Putative uncharacterized protein F4F15.2908954e-094
Q944A8 AT3g52180/F4F15_2908902e-093
Q8LFS3 Putative uncharacterized protein8892e-093

Arabidopsis top hits (Blast detail)Scoree value
AT3G52180.1 SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase8952e-096
AT3G52180.2 SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase8952e-096
AT3G10940.1 protein phosphatase-related3137e-029
AT3G01510.1 5'-AMP-activated protein kinase beta-1 subunit-related2071e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  42%
 
83  25%
 
92  17%
 
72  17%

Unigene MembersMember information