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Information for unigene UN17717
| FASTA Sequence |
| Unigene ID: UN17717 | Length: 1453 |
| SNP | GGTTATAATAAGATTTCACTAGTAAAGATTCCAAAGTCAAGCAATCGTATTATCAATAACCGAAAAAACATGAATCCAAACTTGAC
CGCATAGACAAACCCCGAAAAACTGTACTTTTGGGGTCTCCCAATATCAATTATACACCCCATAGTTAACACCAAACGATACGTTT
TTTGTTCTTGTTAGTCCTAGAAGTAGTACTTAAAACTCGCGGAGCGTCTTGTCATAAAACCCGGGTATCCAAATCAGAGTGAACCT
TCTCCAGAAGATTTTTTCTTGCCCCAGCATTTTAGTTTGTTGCTGAGAGGAGTTTTTGACACCGGAATGAATTTCCCCACCAGAGC
AAGAGGCCAACTGATCACACCGATGGCAACACATATTAGCCATTGTTGCCAGTTAAGTTTTGTCGTGGAAGCGAATTTGCCGAGGA
ACTCAACAATGATAACCTGGAGGACGAGAGTTATGACTATTATTCCCATGAAGAGACGATTCTTGATAACGCCTTTGAAGATGTTC
TTCTCGTCTGGTTTTCGAGCATTGAACTCGTTGAAGGCTTGGCAGAGCACGAAGGCGTTGAAAATTATTGTGTTCTTCACTCTGGT
GGCATGTGTGGGAACTTCATGCTCGAGGCCAAGTATGCTTATGCCCCGGAAATTGAGAACCAGCAGTACAATCACTTGATAGATAG
CCTGAATCAACAGGTTTCTCCACATGATGTTGGTAATAAGAGGCTCCTTTCTGCCCACAGGAGGTCTTCCCATGAGGTGATCAGTA
GGTGGTTCAGTAGCTAAAGCCAACGCTCCGAGAGTGTCCATAATCAGATTAACCCACAGAAGCTGCACAGCGGTAAGTGGAACGTC
ACCGCTTGAAATAGCAGCTACGACGTTAATGACAAGAGCGGCAACATTGACTGTGAGCTGGAACTGGATGAATTTCTGAATGTTGG
CGTACACTGATCGTCCCCAGCGAACAACCTTGACAACTGAAGCAAAGTTATCATCCAAGATAATGATGTCCGAACTTTCCTTAGCA
ACTTCTGTTCCTGCTATTCCCATAGCAAGACCAATATCGGCCTCGTGGAGTGCGGGAGCGTCATTTGTCCCATCTCCAGTCACAGC
AACAACATGCCCACGTCTTCTAAGCGATTGTACCAGCAGAAGCTTGTCATTGGGAGATGAGCGGCCCATAACCGATATTTTGTCAC
TAATCTTGTCCCTTTCTGCCTCAGTCAAGGCGCGGAATGATTTTCCTTCAATGAGAGTAGGCTCGGAGGCATCAGCATCTGACGTT
AATATTCCACACTCCAAAGCAATAGCCCTGGCAGTTTGGACGTTGTCACCAGTGACCATACGGACCTTGACACCAGCGTTCTGACA
CAACTGAACTGAATCTTTAACTCCTGGTCTGCATGGATCCTTTATGCCTACTATAGCTAGCAAAATAAGGTCGTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34212 unnamed protein product [Thellungiella halophila] | 1948 | 6e-216 |
| NP_851200 calcium-transporting ATPase 8 [Arabidopsis thaliana] | 1905 | 5e-211 |
| XP_002866184 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1904 | 7e-211 |
| BAA97361 Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] | 1898 | 3e-210 |
| BAH20100 AT5G57110 [Arabidopsis thaliana] | 1897 | 5e-210 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type | 1905 | 2e-212 |
| Q9SZR1 Calcium-transporting ATPase 10, plasma membrane-type | 1640 | 1e-181 |
| Q9LU41 Calcium-transporting ATPase 9, plasma membrane-type | 1586 | 2e-175 |
| Q9LY77 Putative calcium-transporting ATPase 12, plasma membrane-type | 1309 | 3e-143 |
| Q9LIK7 Putative calcium-transporting ATPase 13, plasma membrane-type | 1287 | 1e-140 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WV19 Ca2+-transporting ATPase like protein | 1905 | 4e-211 |
| B9DH83 AT5G57110 protein | 1897 | 3e-210 |
| A2Q410 Cation transporting ATPase, C-terminal | 1659 | 1e-182 |
| Q0WPI8 Ca2+-transporting ATPase like protein | 1640 | 2e-180 |
| B9RWZ4 Cation-transporting atpase plant, putative | 1636 | 6e-180 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G57110.1 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association | 1906 | 2e-213 |
| AT5G57110.2 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association | 1906 | 2e-213 |
| AT4G29900.1 ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10); calcium-transporting ATPase/ calmodulin binding | 1642 | 6e-183 |
| AT3G21180.1 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9); calcium-transporting ATPase/ calmodulin binding | 1586 | 2e-176 |
| AT3G63380.1 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) | 1309 | 3e-144 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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