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Information for unigene UN17720

FASTA Sequence
Unigene ID: UN17720Length: 1519  SNP
GCATATGAACAGGATCCGTTATTGGTTTGTTCTACACTGTTTCTGTTTAGGTCTGGTTCAATTATTTCATAAAATTTTGACTGCAA
ATAACAAACTTAAAAGGGAGAATATCTAAAGAGTCAAAAAGTACACTGAAGACGAAAACAAAAGTTGATGGAACATATGCTCTGCT
AAAGAAAGTCTAATTGTAGACCATGTACTTGGGAGTTGCACTGAACTTCTGATAACCTTTGATGACTTTGTTCACTGCGTCCAGAA
AGTCTTTCTCAGTCACAGTCTTTCTCCTAGCTCTGATCGCATACATTCCAGCTTCAGTGCACACACTTCTGATATCAGCTCCAGTT
GAGTTCGGGCAGAGACGAGCAAGGAGTTCGTAACGGATGTCTCTCTCGCAGTTCATGGTTCTTGTGTGAATCTTGAAGATCTGTGT
TCTGCTCTCCAGATCAGGAAGACCAAACTCAACCTTACGGTCAAGACGTCCAGGACGTAGAAGAGCAGGGTCCAGCGTGTCAGGCC
TGTTTGTTGCCATAAGAACCTTGATGTTACCCCGTGCGTCAAACCCATCAAGCTGATTCACAATCTCAAGCATAGTACGTTGGACT
TCGTTATCACCTCCCGCACCGTCATCAAATCTTGCACCACCAATGGCATCAACTTCATCAAAGAACACAATGCAAGCTTTTTTGGA
CCGAGCCATCTGAAACAATTCACGAACCATCCTAGCTCCCTCACCGACATACTTCTGGACAAGCTCACTGCCAATAACTCTGATAA
AGCAAGCATCGGTTCTGTTAGCAACGGCTCTTGCCAAAAGGGTTTTACCGGTACCAGGAGGACCGTAGCAGAGAACTCCCTTGGGA
GGATCTATTCCAAGCTTCACAAACTTCTCTGGATGAAGCATTGGCAGCTCAACCACCTCTCTCATCTTCTCAATCTGCTCCTTGCA
GCCACCAACGTCATTGTAAGTAACATCAGGTTTCTCTTCAACAGTCATCATGGTGACACTAGGATCGATCTTTGGAGGTAGAGGAA
TCTGTATCTGATACTTGGTCCTATCAACTCCTACACGCATGCCTTCTTCAATGTCAGTGGGAGACACTTTATCGCCAAGGCCAACG
ACAAACTTAGCAATCTGTTTGACATTGATGACGTACTTGGCGTCTTCAGTGTTTGGACTAATTATCTTAGTGCATCTAGCAACCTG
GAGAGGTTGCTCCTCTTGCATCATCTGTTTATCAGCGACGAGATCCCATTGACTAGGAAGAGCTAAACCAGTATCAGACTCCTTGA
TACCACAGAGATCGTTGATCTTCTTGGCGAGCTCTTTGATTTCTTTCTCCACTTTCTTGTCAGCTACAGAGTAAGGACTTAACCCG
TAAGTCTTGAGGAGAGCGATGTCATCTTCGTCAAGGGGCGGAGGATTCTTCTCGTCTCTGATCTCATCTTCGATATCTCTCGTCAT
CGTTCGCCGGAGTTCGATCGGAGATTTTGAGATTTTAACGATTCTTGGCTTGCCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175778 regulatory particle triple-A 1A [Arabidopsis thaliana]21431e-238
AAF22521 26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana]21351e-237
AAP72958 26S proteasome subunit 7-like protein [Lactuca sativa]21199e-236
AAP72957 26S proteasome subunit 7-like protein [Lactuca sativa]21181e-235
XP_002326437 predicted protein [Populus trichocarpa]21153e-235

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSB5 26S protease regulatory subunit 7 homolog A21436e-240
Q9FXT9 26S protease regulatory subunit 721079e-236
Q41365 26S protease regulatory subunit 720971e-234
O64982 26S protease regulatory subunit 720962e-234
Q86JA1 26S protease regulatory subunit 717923e-199

TrEMBL top hits (Blast detail)Scoree value
A1KXE0 26S proteasome subunit 7-like protein21196e-236
A1KXD9 26S proteasome subunit 7-like protein21188e-236
B9MUK8 Predicted protein21152e-235
C5XFY9 Putative uncharacterized protein Sb03g03050021107e-235
A2XAB9 Putative uncharacterized protein21071e-234

Arabidopsis top hits (Blast detail)Scoree value
AT1G53750.1 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase21444e-241
AT1G53780.1 ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl cis-trans isomerase17871e-199
AT5G19990.1 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase8837e-095
AT5G20000.1 26S proteasome AAA-ATPase subunit, putative8773e-094
AT1G45000.1 26S proteasome regulatory complex subunit p42D, putative8398e-090

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  18%
 
105  29%
 
93  18%
 
114  24%
 
82  12%

Unigene MembersMember information