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Information for unigene UN17724

FASTA Sequence
Unigene ID: UN17724Length: 792 SSR 
GGACCCTCCGTCGCTTACATCTCTCCCCCTCCTCTCACTCTTACTTATCTTCTTCTTCTTCTTACATAGGAAGAACCCTAAAAATC
GAATAACAAGATGAATAGGGAGAAGTTGATGAAGATGGCTAACACTGTCCGCACTGGCGGTAAAGGGACTGTAAGAAGGAAGAAGA
AGGCTGTTCACAAGACAAACACGACCGACGACAAGAAGCTACAAAGCACTCTCAAGAGAGTTGGAGTCAACTCCATTCCCGGTATC
GAAGAAGTTAACATCTTTAAGGATGACTCTGTGATTCAGTTCCTTAACCCTAAAGTTCAAGCTTCCGTTGCTGCTAACACATGGGC
TGTGAGCGGTACACCACAGACCAAAAAGTTGCAAGACATACTTCCACAGATTATCAGCCAACTTGGAACTGATAACTTGGACAACC
TAAAGAAGCTAGCAGAGCAGTTCCAGAAACAGGCACCAGGTGGAGGAGCTGATGTTCCAGCGACTATCCAAGAAGAGGACGACGAT
GATGATGATGTCCCAGAACTTGTAGCGGGAGAGACTTTCGAGACTCCTTCTCCTGAAGAAGCTGCTAAAGCTACTGCCTCCTAAGT
GAAGAAGGCTCACCAGCAAAACCCCTCACCATAAAAAAAAATGTTTGGTGCTCGACCTTTTTTGAGCACCGTTCAGAATTCTTGTT
TTCTCTGTCGTTACGAACAGAAAGACTTGGTTTTGTTATCACTTGATGCGTTTTGTCTTAACAGCAATTTTCCTTTTATTAAGTGG
TTAGATCGCTTCCTGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177466 nascent polypeptide-associated complex subunit beta [Arabidopsis thaliana]7351e-075
AAM61406 putative transcription factor BTF3 (RNA polymerase B transcription factor 3) [Arabidopsis thaliana]7313e-075
BAH20425 AT1G73230 [Arabidopsis thaliana]7304e-075
NP_173230 basic transcription factor 3 [Arabidopsis thaliana]6802e-069
BAJ34579 unnamed protein product [Thellungiella halophila]6802e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q4KLF5 Transcription factor BTF3 homolog 44282e-041
Q5M8V0 Transcription factor BTF3 homolog 44282e-041
Q96K17 Transcription factor BTF3 homolog 44229e-041
Q9CQH7 Transcription factor BTF3 homolog 44229e-041
Q5RC59 Transcription factor BTF3 homolog 44229e-041

TrEMBL top hits (Blast detail)Scoree value
Q9CAT7 Putative RNA polymerase B transcription factor 37357e-076
Q8LFH4 Putative transcription factor BTF3 (RNA polymerase B transcription factor 3)7312e-075
B9DI58 AT1G73230 protein (Fragment)7303e-075
Q9SMW7 BTF3b-like factor6802e-069
Q93ZB5 At1g17880/F2H15_106783e-069

Arabidopsis top hits (Blast detail)Scoree value
AT1G73230.1 nascent polypeptide-associated complex (NAC) domain-containing protein7444e-079
AT1G17880.1 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative6881e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
101  17%
 
113  50%

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