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Information for unigene UN17725
| FASTA Sequence |
| Unigene ID: UN17725 | Length: 819 |
SSR | | GGGGACCGAGAGAGAACCCAACACATTCAATTTGTCTCCGGCGAGATCTCATTTCTGATCCTTCACGGTGGCGTCGACGTCAGGGC
AACAACAAGAAGGTCTCTCAAGAAGGAAGCCTCCATCATCATCATCATCATCATCATCATCTCCTCCTTCCTCTGATTCGCCTCTA
CTACGAACTCCCTCGGCGAGGAAAGCGAGCCCCGAGTTTCCCTTTTATCAGCAGAACTGGTTCATCGCTCTCCTCTTCCTGATGGC
TATGGGATTCTTCTGCCTCGCTCTCTTCCTTTACCTCGGCCTTGATCCCGATTCCGGCTACACCTCTGCCTCCGCCGCAGCGCCTT
CCGGTAAAGAAGGCGTCGAGGTAAGTTATGGGAGTGCGATAAAGCTGATGCACGAGAAGACGAAGTTTCGTCTGCATTCTCACGAT
GTGCCTTATGGATCCGGTAGTGGTCAGCAGTCTGTTACTGGCTTTCCTGGCGTCACTGATTCCAACAGCTACTGGATTGTAAAACC
TGTGCCTGGGACAAAAGCCAAGCAAGGTGATGCCATCAAGAATGGAGAAACCGTTAGATTGCAGCACATGAAGACCAGAAAATGGC
TCCACAGTCACCTACACGCATCCCCTATCTCTGGAAACTTAGAGGTTAGCTGCTTTGGAGATGATTCAAATTCCGATACTGGGGAT
CACTGGAAGCTTACAATCGAAGTAGTGGTAAGACATGGAAACAGACCAAAGAGTCCGTCTTCACACATTGACACTAGTGGCTACCT
CCATAGCACGACAGAGTACACGCATTGCCGTGGTCAGCAGAGTCT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_565585 stromal cell-derived factor 2-like protein [Arabidopsis thaliana] | 770 | 9e-080 |
| AAM65625 unknown [Arabidopsis thaliana] | 770 | 9e-080 |
| XP_002878825 MIR domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 761 | 1e-078 |
| 3MAL Chain A, Crystal Structure Of The Sdf2-Like Protein From Arabidopsis | 661 | 4e-067 |
| XP_002515438 Stromal cell-derived factor 2 precursor, putative [Ricinus communis] | 642 | 6e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZE8 Stromal cell-derived factor 2-like protein | 775 | 1e-081 |
| Q54P23 Stromal cell-derived factor 2-like protein | 342 | 2e-031 |
| Q99470 Stromal cell-derived factor 2 | 296 | 4e-026 |
| Q9DCT5 Stromal cell-derived factor 2 | 296 | 4e-026 |
| Q3SZ45 Stromal cell-derived factor 2 | 293 | 8e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RNW9 Stromal cell-derived factor 2, putative | 642 | 4e-065 |
| C6TJ58 Putative uncharacterized protein | 639 | 1e-064 |
| C6TNG6 Putative uncharacterized protein | 636 | 2e-064 |
| A9PIH6 Predicted protein | 607 | 5e-061 |
| A9PAE2 Putative uncharacterized protein | 605 | 8e-061 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G25110.1 SDF2 (STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN PRECURSOR) | 775 | 1e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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