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Information for unigene UN17742

FASTA Sequence
Unigene ID: UN17742Length: 1138  SNP
ACAGCATCACTCAAGTCTCAGTTAAGCAAAGATAAAATCAAAGTTTGCCACAAAGTATCTTAAAAGATCTTTTAACTCAATGCGAA
AGACTAATAAAAAGAGAGTTGCATACAACAAAGAAGCTTTGTTTGGATATGGATAGAGATAGAAAGTTGGAAGACAAATGTGAAGA
AGATAATAAGCTTAAACAAGAATCATTCATTCATTCACCTTTGATGTTATTATCATTCTCTACAACAGCATCATCACTTGGAAGAT
CAATCCCCTTTGGAATCTTCCCTGGATAATCAGTCACTGATTTGTCCGATCCTAACATACTTCTATCAACGATGACCATTGAGCGT
AGCTCGCAATTCGCAAAGTGGCTGCAAATCTCCTTCTTAACATCTGGATGGCACTCACTCTGTAGAGCGTTCAGCGTGTGAAACAA
GAAACCACTGTGTGTCACAATCGCTATCTCTTTTTCTTTCCTTGTCCATAGCCAGTTGAGGAACTTTTTGCCTCTAGCCGCAAGTT
CTTCGATTGTTTCTCTAACGTCAGCCTTCCATAACTTATCTTCATCGCTTTCTATCAGTGAAAAATCAACAGCGGGGAAAAGAAAC
TGATAGTCGCTGATGCTTCTTCTCTGATCGCATGGATGCACTCCCAAATGTTCTCTGCAGGACTCCTCTGTGATAATTGGTGGGCA
GTTTGAACTGGATATAGCTGCACGGTTGCTGTTTCCTGCATTTGCTACCATTAGAGGTAGTACATCGCTCATATCCGTGTAGCCAT
CTCCACCGAAAACACCGACGGCAGTTTGCATCGTTCTCATGAGTGGAGACGAGATGACCAACTCAATCTTCTTGTGAAGTCCACTG
GAACGAACATGCTTACGCAAATTATCAACCTGTTGCCAGCCAAGTTGGGTCAACTCAGCATCAAAGTAGTCCTGAGACATGTAAGC
CTTATAGTTCTTGTCCCCATCAACATTGTGGATCCCTTGAGCATGTCTCACTAGGTAGATGGTTTTGCAGCGGTGCAGCGGGTACA
AACCTATACCAGCGCCAGCCTCCATCTATGAGATTGGTGGAGATGAACCTAAAGGAGGCTGAGGAGAGAAGATGGGAATGAAGTAG
TAGGAGATGGTCGATGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866616 hypothetical protein ARALYDRAFT_919764 [Arabidopsis lyrata subsp. lyrata]13964e-152
NP_201251 phosphoglycerate mutase-like protein [Arabidopsis thaliana]13921e-151
NP_001078795 phosphoglycerate mutase-like protein [Arabidopsis thaliana]11851e-127
XP_002264303 PREDICTED: hypothetical protein [Vitis vinifera]11706e-126
CBI35448 unnamed protein product [Vitis vinifera]11617e-125

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FGF0 AT5G64460 protein13928e-152
A8MSE9 Uncharacterized protein At5g64460.711858e-128
B9HN69 Predicted protein11491e-123
B9RX49 Catalytic, putative11401e-122
A9PFQ3 Putative uncharacterized protein11087e-119

Arabidopsis top hits (Blast detail)Scoree value
AT5G64460.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).13924e-154
AT5G64460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).13924e-154
AT5G64460.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).13924e-154
AT5G64460.4 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).13924e-154
AT5G64460.6 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).13924e-154

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  33%
 
122  17%
 
113  25%
 
82  17%
 
71  8%

Unigene MembersMember information