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Information for unigene UN17744
| FASTA Sequence |
| Unigene ID: UN17744 | Length: 717 |
SSR | | AGGGGAAGCGTCGTCGATCGCCAAAGCCGTTTTCTCTCTCTCTCTCTTTTGTGGCTATCGTCTCGACCTGAGAGAAGATGAAGTTT
AACGTCGCCAATCCAACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCAGAAACTCCGTGCGTTTTATGATAAGAGACT
CTCTCAAGAAGTCACTGGAGATGCTTTGGGCGAGGAGTTCAAGGGATACGTTTTCAAGATTATGGGTGGGTGCGACAAGCAAGGTT
TCCCCATGAAGCAGGGAGTTCTAACTCCAGGCCGTGTTCGCCTTTTGCTTCACAGAGGAACTCCTTGCTTCAGAGGACATGGAAGG
AGGACTGGAGAGAGGAGAAGAAAGTCTGTTCGTGGTTGCATTGTCAGCCAGGACCTCTCTGTTCTTAACCTTGTCATTGTCAAGAA
GGGTGAGAAGGATCTTCCCGGGCTTACCGATACCGAGAAGCCAAGGATGAGGGGACCCAAGAGAGCTTCCAAGATCCGTAAACTGT
TTAACCTCACCAAGGATGATGATGTCAGGAAGTATGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAAGGAAGTGAGC
AAAGCCCCTAAGATCCAGAGGCTTGTGACTCCGTTGACCCTTCAGAGGAAGAGGGCTAGAATCGCTGACAAGAAGAAGAGGATTGC
TAAGGCTAACTCTGATGCTGCTGAGTACC
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| GenBank top hits (Blast detail) | Score | e value |
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| AAZ66937 117M18_18 [Brassica rapa] | 1087 | 1e-116 |
| XP_002863274 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1060 | 2e-113 |
| NP_194898 40S ribosomal protein S6-1 [Arabidopsis thaliana] | 1059 | 2e-113 |
| XP_002873453 EMB3010 [Arabidopsis lyrata subsp. lyrata] | 1059 | 2e-113 |
| NP_196598 40S ribosomal protein S6-2 [Arabidopsis thaliana] | 1054 | 8e-113 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48549 40S ribosomal protein S6-1 | 1059 | 1e-114 |
| P51430 40S ribosomal protein S6-2 | 1054 | 4e-114 |
| Q9M3V8 40S ribosomal protein S6 | 1030 | 2e-111 |
| P62753 40S ribosomal protein S6 | 714 | 1e-074 |
| Q4R4K6 40S ribosomal protein S6 | 714 | 1e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q4AC02 117M18_18 | 1087 | 8e-117 |
| Q3HVK4 Ribosomal protein S6-like protein | 1049 | 2e-112 |
| B9RJN4 40S ribosomal protein S6, putative | 1033 | 2e-110 |
| B9T0A0 40S ribosomal protein S6, putative | 1030 | 3e-110 |
| A9P9Y9 Predicted protein | 1029 | 4e-110 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31700.1 RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome | 1059 | 9e-116 |
| AT5G10360.1 EMB3010 (embryo defective 3010); structural constituent of ribosome | 1054 | 4e-115 |
| AT4G31700.2 RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome | 738 | 2e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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