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Information for unigene UN17778

FASTA Sequence
Unigene ID: UN17778Length: 751 SSR 
GGGATTCCTCTTTGGAGCTTCTCTGCGTTGGATTCGAGGCGCAACACAGAGATTTGGCATCCAGAGGAAGGAAGAAGAAGAAGAAG
ACTGCTCCAATGGCTGATCCTGAACTAGAAGCTATTAGACAGAGGAGAATGCAAGAGCTCATGGCTCGACATGGCACTGGGAAGCA
GGGCAACCAACAGAATCCAGATCAAGAGAGAGCTCAAGAAGATGCTAAAAGGGAAGCTGATGAGCGTAGACAAATTATGCTTAGTC
AAATATTGTCTTCCCAAGCCCGAGAGAGGATTGCTAGAATTGCCCTTGTGAAACCTGAGAAAGCTAAAGGTGTTGAGGATGTTATT
TTAAGGGCTGCTCAAATGGGACAGATTGTTGAGAAGGTTTCTGAGGAGCGACTTATAACGCTGTTGGAACAAATAAACAGCCAAAC
AACCAAACAGACTAAAGTCACGATCCAGAGGCGTCGTGGGGTGGACGACGATTAGGAAGAAGAAGAAGATTATGCGATCTATGGGA
GATCTCACTGTTGAGTTCACTAAGATGTACTTACTGTGAAATATGTTTATTGTGGGTGAATCTTAATACTCTTCCAAATGAGATCA
TAAAAGTAATCTCAAACTGAAACTCTTTATTTTATCCTTTTTGGCATTTCTTCTGTGAACCATCCCTATCTCTTTTTATCTTTCTC
TCCTCGCATTGCCTTGTATGGTTTGAATATTAATTTAAAAGAAAAAAACGATTGTGTTGTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564336 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5906e-059
AAM64794 unknown [Arabidopsis thaliana]5871e-058
XP_002890834 hypothetical protein ARALYDRAFT_473195 [Arabidopsis lyrata subsp. lyrata]5834e-058
NP_849728 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5781e-057
NP_001154384 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5484e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q54YS0 DNA-binding protein DDB_G02781112561e-021
O13929 Uncharacterized protein C23C4.09c2542e-021
O14737 Programmed cell death protein 52166e-017
P56812 Programmed cell death protein 52166e-017
Q5RBT0 Programmed cell death protein 52166e-017

TrEMBL top hits (Blast detail)Scoree value
Q9FXG0 At1g29850/F1N18_195904e-059
Q8LBF6 Putative uncharacterized protein5879e-059
B4UW59 Double-stranded DNA-binding protein5197e-051
A9PGX0 Predicted protein4937e-048
B9S167 Programmed cell death, putative4883e-047

Arabidopsis top hits (Blast detail)Scoree value
AT1G29850.1 double-stranded DNA-binding family protein5912e-061
AT1G29850.2 double-stranded DNA-binding family protein5795e-060
AT1G29850.3 double-stranded DNA-binding family protein5482e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  43%
 
83  43%
 
121  14%

Unigene MembersMember information