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Information for unigene UN17790

FASTA Sequence
Unigene ID: UN17790Length: 791 SSR 
CTGGATGAAAGAATGAAACTTTGCAGACTTTTGTTTACTGTCTAATATGAGTCAGAGAATAAGAAGATGATATAAAGTTTTGAGAA
AAAGAAATTACAAGAGTTGAAATAAGATTATGATATAACATGTAAACAATGTGTTTTTTTTCCCTGCCTTCTTGCAAAGGCCTCAG
GATAAAATCTCAGGGAGCGTCAAATGTCTCTCTCTCTCTCTCTCTCGTATTTTTACCAGCGAGTTTCTAACTCACAAGAACCGAGG
CCTCCGATCGGCAGGCTTAAGAATTTGGAAAGAACACATTAAACTCTCATCAACACTCATCATAGCACCAGCATTATCGAATTCAC
CACAGTAATTAGGAGCTGAAAATATAGTAACAAGCTGTCTATCGGCAAAGAACTCATAACCATCCTCTACAACCTGGTGGGCACGA
CAGATGAGATCCATATCGTTCTTTATCAAAAACTCAGCGACTTTATCAGGCCCAAAAGTGTAAGAAACCCCACGGTCATTCATCCC
CCACCCTTTCACATCTTTGCTCGGATCAGACCAAAGCAGATCGCACAGCAAACCAGAGTCAGGAACATCGGTAGGCCGCTTAATGT
TCTTGATCTGCTCCACGTTGGTCAGATCGGGAGAAAGGCCACCGTGCATACACAGTATCTTATCGTCTATCACAGCAGCCACGGGG
AGACAGTTGAAAGAATCTGTAAACACTTTCCAGAGTCTGACGCTGAACCTGCGTTTGCATTCGTCGTAGAATCCGTAGATTCTGTT
GATGGAAGCACACTCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200724 serine/threonine-protein phosphatase PP1 isozyme 2 [Arabidopsis thaliana]9761e-103
AAK68780 protein phosphatase [Arabidopsis thaliana]9761e-103
XP_002863032 predicted protein [Arabidopsis lyrata subsp. lyrata]9761e-103
XP_002866317 predicted protein [Arabidopsis lyrata subsp. lyrata]9761e-103
CAA78153 protein phosphatase 1A [Arabidopsis thaliana]9689e-103

Swiss-Prot top hits (Blast detail)Scoree value
P48482 Serine/threonine-protein phosphatase PP1 isozyme 29765e-105
P48485 Serine/threonine-protein phosphatase PP1 isozyme 59183e-098
O04856 Serine/threonine-protein phosphatase PP1 isozyme 18951e-095
O04857 Serine/threonine-protein phosphatase PP1 isozyme 28871e-094
P48489 Serine/threonine-protein phosphatase PP18807e-094

TrEMBL top hits (Blast detail)Scoree value
B9DHU3 Serine/threonine-protein phosphatase9768e-104
Q8LBH8 Serine/threonine-protein phosphatase9184e-097
B9S3C7 Serine/threonine-protein phosphatase8899e-094
B9GJ75 Serine/threonine-protein phosphatase8881e-093
B9HT52 Serine/threonine-protein phosphatase8872e-093

Arabidopsis top hits (Blast detail)Scoree value
AT5G59160.1 TOPP2; protein serine/threonine phosphatase9774e-106
AT5G59160.2 TOPP2; protein serine/threonine phosphatase9774e-106
AT5G59160.3 TOPP2; protein serine/threonine phosphatase9774e-106
AT3G46820.1 TOPP5; protein serine/threonine phosphatase9192e-099
AT2G39840.1 TOPP4; protein serine/threonine phosphatase8734e-094

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  75%
 
121  25%

Unigene MembersMember information