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Information for unigene UN17797

FASTA Sequence
Unigene ID: UN17797Length: 765 SSR 
GGACCCTAATCCACAATCTCTAAAAACATCTGAGATCTCCTTCTCCCTCTGTGTGCGCTCCGAGTTAGTTAGACATGGCCACCACC
GCATCTCCAGCTCCGACGAAGAAATCGAGAAACAGCAGAAAGGCGTTGAAGCAGAAGAACGAGATCGTGGCGACGGCGGAGACTCC
GTCGTCGCCTGTCTCCGCCGCCAAGGGGAAGGGGAAGAAGTCGTCGTTCGAGAAAGATCTGTTGGAGATGCAGGCGATGCTGGAGA
AGATGACGATCGAGAAGGATAAGACGGAGGAGTTGCTCAAGGAGAAGGAGGAGATTCTCAAAAAGAAGGAAGAGGAGCTTGTGACG
AGAGACGCTGAGCAGGAGAGGCTCAAGACGGAGCTGCAGAAGCTTCAGAAGATGAAGGAGTTCAAACCTAACATGACGTTTGCTTG
TGGCCAGTCTCTCACACAAGGTGAGGAAGAAAAGGTGAACAAGAAGAAGAAGAAGAAGGATTGTCCCGAGAGGAAGCGACCATCGT
CGTCATACATTCTGTGGTGTAAGGAGCAGAGGGATGAAATCAAGAAGGAGAATCCTGAAGCTGACTTTAAGGAGACTTCGAACATT
CTCGGCGCGAAATGGGAGTCTCTTAGCGCGGAAGAGAAGAAGCCTTACGAGGAGAGGTACAAGGTGGAGAAGAAGCTTACCTCCAG
GTGGTTGCTATGAGAAGCGTGAGAGAGAGGCATGAAGCTTCTTGATGATGAGCAGAAGCAGAAGACTGCTATGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194111 HMG (high mobility group) box protein [Arabidopsis thaliana]8281e-086
NP_001190816 HMG (high mobility group) box protein [Arabidopsis thaliana]8281e-086
ACC91248 high mobility group HMG1/2 family protein [Arabidopsis halleri]8111e-084
AAC35540 contains similarity to HMG (high mobility group) box (Pfam: HMG_box.hmm, scores: 70.67, 53.09 and 80.15) [Arabidopsis thaliana]7214e-074
AAS79547 At4g11080 [Arabidopsis thaliana]7133e-073

Swiss-Prot top hits (Blast detail)Scoree value
P11633 Non-histone chromosomal protein 6B1701e-011
O04235 FACT complex subunit SSRP11692e-011
Q5KEP6 Non-histone chromosomal protein 61682e-011
Q9UVL1 Non-histone chromosomal protein 61673e-011
Q4PBZ9 Non-histone chromosomal protein 61664e-011

TrEMBL top hits (Blast detail)Scoree value
Q9SUP7 98b like protein8281e-086
B2WS76 High mobility group HMG1/2 family protein8111e-084
O82510 F2P3.3 protein7213e-074
Q700E0 At4g110807132e-073
Q9T012 98b like protein6926e-071

Arabidopsis top hits (Blast detail)Scoree value
AT4G23800.1 high mobility group (HMG1/2) family protein8465e-091
AT4G11080.1 high mobility group (HMG1/2) family protein7247e-077
AT3G28730.1 ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor1611e-011
AT2G18540.1 cupin family protein1243e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
81  50%

Unigene MembersMember information