RadishBase

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Information for unigene UN17808

FASTA Sequence

Unigene ID:UN17808

Length: 1022

CATATCAAATATTCTCAATTTCCAGTGCTGGATTTTATTAGATATCATTTTCTTACTTCTCAATCTACATATATAAAATTACTTCA
TTCCACCAAGCCTGATACAAACTTAATATCCCAAATACACTTAGCAACAATGCTAAATAAAATTAAAACATAAATAAGTAAGTACT
ATCACTCTCATTTTATTCTTGCAAGAACTCATCCCACAAATACACAAGGACCACAACCATCAACTTAGGCCGCAGGCTTGGCAAAG
ATCTTCTTAGCGAATTCAGCCAGAGTTGCAGTGTCGGGCATGACAGGTTTCACAGCAGGATCGTTACAAAATTGCTCAGCCCATTT
GGATAGAGAAGGAGTCTTGGCCTCATCAAGAACTTTATGACCAGCTGCCAACTCGGTGACTCTCAACCAACCAAGGAAGCACCCGA
ATGCAATGTCGAGGTAACCGACGTGTTCACCGTTGAAGAATGGTTTTCCTTTGCTGCAATCGATGAAGGCCTTCTCGAGAAGCGCG
GTCCCTTCTTCCACTTGAGCTAGCACAGCTTTCTTCTCTTCTTCTCCCTCAGCTTGTAGGATACTTTTTAGAGAGGGAAACCACTT
TTCGTCAATGTAGGCAGCCCAGAACCGAGCGATGGCTCGGTCATAAGGATTAGAAGGTAGCATGGACGGTCCAGATGTGCTCCAAG
TCTCATCAACATACTCAACGATGATGTTAGATTCACAAACCGGTTTGTCAGCATGAATCAGAACGGGAATCTTCTTGTGAACCGGG
TTTGATTTAAGAAGCAACTCGCTCTTAGAACCAAATGTCTCCTGGAGGAACTCGTAGGAAACAGACTTGAGGTTCAGAGCAATCCT
CGGCCTCATCACAAAAGGACTCGCCCATGCGCCGATCACCTTCACTTCGTCGCTAGCCATTTTCACCTCAAGATCAAGAACAGAGA
AGGAATTGGTTTAACAAGTTGAAGCTTAAGTGGTAGATCGTAGGGAATTATATGGAAGCGAAGAGGTGGTAGGTCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
BAJ33933 unnamed protein product [Thellungiella halophila]	1072	1e-114
XP_002892563 glutathione S-transferase [Arabidopsis lyrata subsp. lyrata]	1044	2e-111
NP_172508 glutathione S-transferase [Arabidopsis thaliana]	1026	3e-109
BAB63917 glutathione S-transferase [Arabidopsis thaliana]	1013	9e-108
XP_002892562 glutathione S-transferase 29 [Arabidopsis lyrata subsp. lyrata]	961	9e-102

Swiss-Prot top hits (Blast detail)	Score	E value
Q06398 Probable glutathione S-transferase GSTU6	574	3e-058
P32110 Probable glutathione S-transferase	444	4e-043
P49332 Probable glutathione S-transferase parC	439	1e-042
Q03666 Probable glutathione S-transferase	433	7e-042
P50472 Probable glutathione S-transferase BZ2	424	8e-041

TrEMBL top hits (Blast detail)	Score	E value
Q9FUS8 At1g10370	1026	2e-109
Q94II0 Glutathione S-transferase	1013	6e-108
Q9FUS9 AT1G10360 protein	936	5e-099
B6SK16 Glutathione S-transferase GSTU6	919	5e-097
Q9S7M6 Glutathione S-transferase 1	770	9e-080

Arabidopsis top hits (Blast detail)	Score	E value
AT1G10370.1 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase	1027	8e-112
AT1G10360.1 ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase	937	2e-101
AT1G59700.1 ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16); glutathione transferase	666	6e-070
AT1G59670.1 ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15); glutathione transferase	633	4e-066
AT1G69930.1 ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11); glutathione transferase	595	1e-061

EST library breakdown for ESTs in the assembly


7	6			12%


9	6			12%


10	3			6%


6	11			22%


12	8			16%


8	9			18%


11	4			8%


18	1			2%


19	1			2%

Unigene Members