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Information for unigene UN17815

FASTA Sequence
Unigene ID: UN17815Length: 970  SNP
ACCTAGTTCAACAAAATCACTCATTTGACATTTGTTGGAAAGTAAACTTCAAGCAAATAACGAAACTGTCTTCTTCATAAATATCA
AAATTAAACAGGAGATAAGGCAAACCATAGCAAAATCAAAAACATGAGTCCACAAGAAACTTGGAAACAATAATCAGACTGCAATA
GCGCTTCCTTATAGCAAAGATGACATCCTTAGATTTTGTTGAAAGCAACAATGTCACAGCTCTGGACAAACTCATTGATTGGCTCG
ACGGTGAGCGTCTCTTCAATCATGGTGTCAACAGAGACGAGGTCGTCAACAATGGTGCACATGATCTGCAACTTCTTGATACCGTA
ACCAACCGGTACAAGCTTGGATGCTCCCCAGAATAAACCTTCCATCTGGACGGATCTCACAGCTTCCTCTAGCTTCTTCATGTCAG
TCTCATCATCCCATGGCTTGATATCAATCAAAACAGACGACTTTCCAGATTCCTTCTTCTTTGTGGATGCCTTTACAGAAGCAGCT
CTCTCTTCAGCAGCCTTCTTCTCCTCCTCGGTCTCCTCACCAAAAAGGTCAACATCATCATCATCCTCTTCATCAGCAGCATCCTT
AGAATCAGCTGCAGGAGGAGTAGCAATAGCCTCTTCCGAAACTGGGGCTGATCCCTCAACAATGACACCACTTCCCTCAGCAGAGA
CACCTGAGATCCTCAAGAGGGCATCGATGTGGTTGTACCAACGAGAAGCGTTCACAAACTGCGAGGTTGGTGGCTTTGCAAGAGCA
GCAAAGACAGTGATATCATCCTTGGAAGCCTGGTACCCAGTGATGTAACTGCGAGTGAGAAGATGCTCATCGAGCTTCTTCAATCC
AGCTTCAGTGTTAAGGTTGGGGAAGGCAGCCATTATTCTCTAAAAGCTCGAACCTTTTCACTGAGTTACAAGGAGACTTGAAGATG
AGCGACGGAGGCGAGGAGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABK78691 putative elongation factor 1-beta [Brassica rapa]11203e-120
XP_002890860 elongation factor 1-beta [Arabidopsis lyrata subsp. lyrata]11185e-120
NP_174314 elongation factor 1-delta 1 [Arabidopsis thaliana]11151e-119
E86426 probable elongation factor 1-beta [imported] - Arabidopsis thaliana11151e-119
NP_001077627 elongation factor 1-delta 1 [Arabidopsis thaliana]11151e-119

Swiss-Prot top hits (Blast detail)Scoree value
P48006 Elongation factor 1-delta 111155e-121
Q9SI20 Elongation factor 1-delta 210842e-117
P93447 Elongation factor 1-delta8881e-094
O81918 Elongation factor 1-delta8692e-092
Q40682 Elongation factor 1-delta 28476e-090

TrEMBL top hits (Blast detail)Scoree value
A0T2P4 Putative elongation factor 1-beta11202e-120
A8MRC4 Uncharacterized protein At1g30230.211158e-120
B3LF87 At1g3023011158e-120
Q39124 EEF-1beta protein10485e-112
C0LJH8 Seed ripening regulated protein9714e-103

Arabidopsis top hits (Blast detail)Scoree value
AT1G30230.1 elongation factor 1-beta / EF-1-beta11164e-122
AT1G30230.2 elongation factor 1-beta / EF-1-beta11155e-122
AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative10851e-118
AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2)6631e-069
AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1)6612e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  24%
 
104  24%
 
117  41%
 
122  12%

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