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Information for unigene UN17834
| FASTA Sequence |
| Unigene ID: UN17834 | Length: 673 |
SSR | | GGAATCTCTGAATCTCTCTCTCTCTCAAATCAAATCAAATGACGACACTCTTAGGGTTCTCTCATACCAAGTTACCCCACTGCAAC
GTCTCTATCACTTCTCCAACATGCCCATCTTCCTCCACGGTTGTCTCAATGGTGGGGAGACGCTCTGACCATGGAAGGCACATGAA
AGGTTTCAACAGGTCGAAGGTGAGAGAGCCAGTGATTGAGCCCGTTGTGGAGGATCCTGAGGACGTTGCTGGAGAAGAAGAAGAGG
ATGATTTGATCAAGGAGATTGTGCGTACCAAGTACTTTGAGATGCCACCATTGACTGTCTCTGAGGCAGTGGAGCAGTTGGAGTTA
GTAGCTCATGATTTCTACGGCTTCCAGAATGAAGAAACCGGTGAGATAAATATAGTGTACAAGAGAAAAGAAGGAGGGTACGGTCT
GATAATCCCTAAGAAAGATGGCAAGGCTGAGAAAGTTGATCCGCTTCCAACTGAGCAATTGAATGAACACTCTTTTGCTGAGTAGA
CTTGTGTGTCTGTCTCAGAACCAAAACTGATCTTACTTCTCTCCTTACAGATGGTTTGCATGTATAAGGGTTCTTGAGAGAAAACA
GTGAAAGAACTTGAATCTGTTATGATTCAGGAAACAGTGTACATAATAATAAAAGGCAAGAGAAATTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568447 putative 30S ribosomal protein [Arabidopsis thaliana] | 571 | 7e-057 |
| BAB11201 unnamed protein product [Arabidopsis thaliana] | 571 | 7e-057 |
| XP_002872116 hypothetical protein ARALYDRAFT_489312 [Arabidopsis lyrata subsp. lyrata] | 568 | 2e-056 |
| XP_002524427 Plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative [Ricinus communis] | 449 | 1e-042 |
| ABK95986 unknown [Populus trichocarpa] | 448 | 1e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P19954 30S ribosomal protein 1, chloroplastic | 409 | 2e-039 |
| P47908 Light repressed protein A | 212 | 1e-016 |
| P74518 Light repressed protein A homolog | 197 | 8e-015 |
| P47995 Uncharacterized protein Sca_0400 | 175 | 3e-012 |
| Q4L4H7 Uncharacterized protein SH2139 | 168 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94K97 Putative uncharacterized protein At5g24490 | 571 | 5e-057 |
| Q9FLV3 Similarity to ribosomal protein 30S subunit | 571 | 5e-057 |
| B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative | 449 | 7e-043 |
| A9PHY3 Putative uncharacterized protein | 448 | 9e-043 |
| B9IDE9 Predicted protein | 448 | 9e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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