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Information for unigene UN17863

FASTA Sequence
Unigene ID: UN17863Length: 987  SNP
TATTTGAAGTTTTTGTTGAATTCTTGAAACAGAGAAAATAACACGAGTTCCAAAACAAAAAATAACCAAAGCGAAGTCTACGAAAA
CGTAAAACGTCTAAAAGGACATAATAAAAGAGCTGGAAAAAATGACAAAAATCAAGCAGCCTGTTGACCAGCAAGCCTCTTCTTGG
CTTCCTCAATGATGGTAAGCTTAATACCTTTACCCTTGGGAAGAGACACCCACGGCTTTGTCCCTTTGCCAAGGGTGAACACATTA
CCCAACCTCGTCGCAAACTCATGTCCCGTCGAGTCCTGGATGTGGATCGTCTCGAAGCTTCCCTTATGCTTCTCACGGTTCTTAAT
CACACCAACACGCCCTCTGTTTCTTCCTCCGGTAACCATCACAACGTTGCCGACATCGAACTTGATGAACTCAACAATCTTGTTCT
CCTCAAGATCGAGCTTGATGGTGTCGTTGGGCTTGATGAGCGGGTCAGGGTAACGGATGGTGCGACCGTCGTAGGTGTTGAGGTAA
GGAATGCCCTTTCGTCCCAACTGGATAGTTCGGACCTTGCAAAGCTTAAACTTAGCTTCCTCATCCCTGATGGAGTGGAGACGGAA
ACGACCCTTGGTGTCATAGAGAAGACGGAAGTTCTCGTTAGTCTTGGGGATAGAGACAACATCCATGAAACCAGCAGGGTAGGTCT
TGTCGGTCCTGACTTTGCCGTCAACCTGGATATGCCTCTGCATCAAGATGGAGATGACTTCACGGTAGGTAAGAGCATACTTCAAC
CTGTTCCTGATGATAAGAACGAGGGGAAGGCACTCTCTAGACTTGTGTGGTCCAGAAGATGGCTTGGGGGCAAAAGCACCGCCAAG
TTTGTCAAGCATCCAATGCTTAGGGGCATTGAGCCTCTTCAGATGCTTCTTTAAACCTCTCGCCATGTTTGGAGTTTGCGAGTGTT
GTAGCTCTGATCCAGGAGAGACGGTGAAGTTTGTGAGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568179 40S ribosomal protein S4-2 [Arabidopsis thaliana]13391e-145
XP_002864574 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]13372e-145
BAB11167 40S ribosomal protein S4 [Arabidopsis thaliana]13345e-145
NP_200650 40S ribosomal protein S4-3 [Arabidopsis thaliana]13336e-145
NP_565414 40S ribosomal protein S4-1 [Arabidopsis thaliana]13328e-145

Swiss-Prot top hits (Blast detail)Scoree value
P49204 40S ribosomal protein S4-213396e-147
Q8VYK6 40S ribosomal protein S4-313333e-146
Q93VH9 40S ribosomal protein S4-113324e-146
P46300 40S ribosomal protein S412868e-141
O22424 40S ribosomal protein S412553e-137

TrEMBL top hits (Blast detail)Scoree value
Q8LJW0 40S ribosomal S4 protein12985e-141
Q2XPX5 40S ribosomal protein S4-like protein12923e-140
B9RG48 40S ribosomal protein S4, putative12896e-140
C6TN03 Putative uncharacterized protein12896e-140
C6TNY3 Putative uncharacterized protein12861e-139

Arabidopsis top hits (Blast detail)Scoree value
AT5G07090.1 40S ribosomal protein S4 (RPS4B)13404e-148
AT5G58420.1 40S ribosomal protein S4 (RPS4D)13342e-147
AT2G17360.1 40S ribosomal protein S4 (RPS4A)13323e-147
AT5G07090.2 40S ribosomal protein S4 (RPS4B)12392e-136

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  40%
 
92  20%
 
122  20%
 
61  10%
 
71  10%

Unigene MembersMember information