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Information for unigene UN17872
| FASTA Sequence |
| Unigene ID: UN17872 | Length: 1130 |
| SNP | ATCTGAAAGAATAAATAACTATCATTTTCATAAAAAATATTTTCCAAAAAAATACATTGACATCTTAACATTTATAAATATATAGG
CACACCTTTAATTTGCTTTATTGGACAAAGATATACAATCGAAAGAATCGAACACAATTGACAAAAGAGGAAGGAGAGCATTATAC
ATATAGAAGAGAAAGAAAGCAGAGGAGGAGGATAAATAGATAAAATGTATATGATCCCTCTATGACCTTGTTGCACATTCCCGAGG
GATTCCCTGTGGAAACCTCTTAGTATCCGTACAGTAATTGTAGATCATGTAGTTCTTCTGAACCCATCTGAGTCTAGCTTGGCTCG
TTGAATCCATTTCTTGAGTGTACCAATTAGAGCTTGGTTTCGTCGTGGTACAAGACGATCTTCCGTTTGAATGAGCACACCCGTCG
ATCTTAATGTTCCTGTAAGAAGCAGTGAATGGAGCTTTGGACCAATCCGTTTTAACCAGACCGCCTCTAGTTGCCCAATCGTCTGC
GTTCCATAAACTTGCGTACATCCTCATCGGCTTGCTCTTTGGAAACAAGACACCGAGAGACTCCGAGTTCTTAAACTCTCTAATTG
GCGTGTTATCGACGGTTAATATGATTCTTTGAGGGTTCCAGAGGATTGAGTAAGTGTGGAAATTTGCTGTTGGGTCGAACCAGAGA
TGGAACTGTTGCTCTTTATCACCTTTACCTTGAGTGTAAACATTGGTGTGTAGAGTATAAGGATCTCCACTCATGTTACCCAAGAA
CTCAAAATCAATCTCATCCCAGGTCGTTCCTTCCGATTTCAAATAGAAAGTTGTGACTGTGCCTGCTGAGTTACCAGGAACAAGCT
TAATCTGCATATCAATCTTACCAAACAAATACTCTGTTTTGGATTGAAAACCAGAACCAGATGATTTGTCTAAGGTGAGAGTAAGA
AGCTGGCCGTTGTTGAGTATCTTCCCACGGCCGTTTCCCCAAGCCACGTTGACGTCGCTGTTGAAGTCAGCGGTGGAGGCTGAAAA
CGCCGCCGCGAGGAGAGCTGTGAATAATAATATTTTGAAAGGAGACATTGTTGTGTGTGCGTACGTGTGGGTGTATGTGTTTGGAG
TTTGGTGAGGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33741 unnamed protein product [Thellungiella halophila] | 1414 | 3e-154 |
| XP_002866213 hypothetical protein ARALYDRAFT_918931 [Arabidopsis lyrata subsp. lyrata] | 1151 | 1e-123 |
| NP_200564 xyloglucan endotransglucosylase/hydrolase protein 22 [Arabidopsis thaliana] | 1147 | 3e-123 |
| BAJ34580 unnamed protein product [Thellungiella halophila] | 1147 | 3e-123 |
| CAN80250 hypothetical protein VITISV_036640 [Vitis vinifera] | 1140 | 2e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38857 Xyloglucan endotransglucosylase/hydrolase protein 22 | 1147 | 1e-124 |
| P24806 Xyloglucan endotransglucosylase/hydrolase protein 24 | 1112 | 1e-120 |
| Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 23 | 1101 | 3e-119 |
| Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 25 | 1071 | 8e-116 |
| Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 20 | 1025 | 2e-110 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5ANA9 Putative uncharacterized protein | 1140 | 1e-122 |
| A5C3A3 Putative uncharacterized protein | 1133 | 9e-122 |
| A5BND5 Putative uncharacterized protein (Fragment) | 1130 | 2e-121 |
| Q84JX3 Putative xyloglucan endotransglycosylase | 1128 | 3e-121 |
| B9SJR0 Putative uncharacterized protein | 1124 | 9e-121 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1147 | 1e-125 |
| AT4G30270.1 MERI5B (meristem-5); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1112 | 1e-121 |
| AT4G25810.1 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1101 | 2e-120 |
| AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1071 | 7e-117 |
| AT5G48070.1 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1028 | 7e-112 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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