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Information for unigene UN17906
| FASTA Sequence |
| Unigene ID: UN17906 | Length: 801 |
SSR | | GGGAAGAGCAGCAGTGAGAGAGAGAGAACCAATCGAATCGAGAGGAAGAAAAGATGTTGTCCGGGTAGGGATATGCGCGAAGCGCG
TCGTGGTCGACGCAAGGCACCACATGCTGGGCCGTCTTGCCTCGATCGTCGCCAAGGAGCTGCTCAACGGACAGAGAGTCGTTGTC
GTCAGATGCGAGGAGATTTGTCTGTCAGGTGGATTGGTTCGACAGAAGATGAAGTACATGAGGTTTCTCAGGAAACGCATGAACAC
TAAGCCGTCTCACGGTCCCATTCACTTCAGGGCTCCCTCTAAGATCTTCTGGCGTACCGTTCGTGGTATGATTCCACACAAGACCA
AGCGTGGCGCTGCTGCTCTTGCACGCTTGAAGGTCTTCGAAGGAGTCCCACCACCTTACGACAAGGTCAAGAGAATGGTCATTCCT
GATGCTCTCAAGGTTTTGAGGCTCCAGGCTGGGCACAAGTACTGCTTGTTGGGCCGTCTGTCTTCTGAAGTTGGCTGGAACCATTA
CGATACCATTAAGGAGCTTGAGGTCAAAAGAAAGGAGAGGTCACAGGCTGTGTATGAGCGTAAGAAGCAGCTCATCAAGCTCAGGA
CTAAGGCTGAAAAGGTTGCAGAGGAGAAGCTTGGAACCCAGCTCGATGTTCTTGCACCCATCAAGTACTGAGAATTGGCATCTATT
ATTTGGATTAATACTTGCTTTGGCGCTCGTCTCGATTCTACCTTTTGAATTTTGTTTGGGCTTTTGGTAGCTTGTAAACTTACAAT
ATTGGAATGAGACATTTTGGTTTTTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1003 | 8e-107 |
| NP_189127 60S ribosomal protein L13a-2 [Arabidopsis thaliana] | 996 | 5e-106 |
| AAL87341 putative 60S ribosomal protein [Arabidopsis thaliana] | 995 | 7e-106 |
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 987 | 6e-105 |
| XP_002865669 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 986 | 8e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRX8 60S ribosomal protein L13a-2 | 996 | 2e-107 |
| Q9SVR0 60S ribosomal protein L13a-3 | 985 | 5e-106 |
| Q9SFU1 60S ribosomal protein L13a-1 | 984 | 6e-106 |
| Q9FKC0 60S ribosomal protein L13a-4 | 978 | 3e-105 |
| O49885 60S ribosomal protein L13a | 904 | 1e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 971 | 3e-103 |
| A9PB37 Putative uncharacterized protein | 962 | 3e-102 |
| B9S526 60S ribosomal protein L13a, putative | 957 | 1e-101 |
| B6VC51 60S ribosomal protein L13A | 956 | 2e-101 |
| A9PHS9 Predicted protein | 953 | 4e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 997 | 2e-108 |
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 986 | 3e-107 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 985 | 4e-107 |
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 979 | 2e-106 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 979 | 2e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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