Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17961

FASTA Sequence
Unigene ID: UN17961Length: 1028 SSR 
GGAAGAGTTTTGGTCTTTAGGCATGCAGCAAGCAAACCAGGCTCTGCTTTCTGGATGCTCAGCCGGAGGATTAGCTTCCATCTTGC
ACTGTGATCAGTTCAGAGAGCTCTTGCCTAGTTCCACTAAAGTCAAGTGCTTAAGTGATGCTGGAATGTTTCTAGACGCAGTGGAT
GTCTCTGGGGGCCACTCGCTCAGGAATATGTTCCAAGGTGTTGTTACTGTGCAGAACCTCCAGAAGGACTTGTCCAGCACTTGTAC
AAACCATTTGGATCCTACCTCGTGCTTCTTTCCTCAGAACTTGGTTTCAGACATCAAAACCCCAATGTTTCTTCTCAACACAGCAT
ATGACTCGCGGCAGATCCAAGAGAGCTTAACTCCTAAAACTGCTGACCCAGGCGGCATCTGGAAGGCATGCAAAGCATACCACTCG
CAATGTAACTCATCACAGATCCAATTCTTCCAAGAATTCAGGAATCAAATGCTGTTCGCCGTAAATTCATTCTCCACATCAGACCA
GAACGGTCTTTTCATAAACTCTTGCTTCGCTCATTGTCAAACTGAAAGGCAAGACACTTGGTTTGCCCAAGATTCTCCCCAACTCA
ACGGAAAGAGAGTCGCAGAGACTGTAGGTGACTGGTACTTCGACCGAGCCAAAAATATCAAAGCCATCGACTGTGCTTACCCATGT
GACAAAACATGTCACAATCTGATTTTCGATGTTCATCAAACAGGTGTAGATTGGGGTGTTGATCAAACAGCTCTAGAGATCTCAGC
TTCTTCTTCTTCTTCAAGATTTTGTTTTACTCTTTTTAGAGCCTCTTTGGTCTCTCTAGTGTTGACAACACTCATCCTCATATGCT
TAGTTCAGTAGGTATAGGGAGACCTTATTCTTTCATACCTCATAGTGTTTTTATAACCCTTTTGATTCAAATGTTGAATCTAAGTT
AGTAATCAAATCTATGTATGCAGAAAAGAATATATCACAAAGAGAAAAAATAATAAGAAACAAAAACTCATGATTATACTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191765 Pectinacetylesterase family protein [Arabidopsis thaliana]12038e-130
XP_002876658 pectinacetylesterase family protein [Arabidopsis lyrata subsp. lyrata]11832e-127
CAB71866 pectinacetylesterase precursor-like protein [Arabidopsis thaliana]11186e-120
XP_002880274 hypothetical protein ARALYDRAFT_483863 [Arabidopsis lyrata subsp. lyrata]10111e-107
NP_182216 pectinacetylesterase-like protein [Arabidopsis thaliana]10031e-106

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84JS1 Putative pectinacetylesterase12036e-130
Q9M1R8 Pectinacetylesterase-like protein11184e-120
O80731 At2g46930/F14M4.2410039e-107
Q153F5 Pectin acetylesterase (Fragment)9752e-103
B9RN21 Pectin acetylesterase, putative9402e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G62060.1 pectinacetylesterase family protein12033e-132
AT2G46930.1 pectinacetylesterase, putative10035e-109
AT3G05910.1 pectinacetylesterase, putative8655e-093
AT1G57590.1 carboxylesterase8468e-091
AT5G26670.1 pectinacetylesterase, putative8468e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information