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Information for unigene UN17980
| FASTA Sequence |
| Unigene ID: UN17980 | Length: 819 |
| SNP | GTGTAACTTCTAATTTATTCCTTCTGGTATGTTATTTTAAGGGTTTAGTAGTTGCATCAGAAGTTAAAATATCTTACAGAGCAAGC
AAACAGTCAAATATTACATAAGCAGAGGAGAGGAGAAGAGAACTAGTCATGGTGTTGCTCCATGTGGTTGAGATGAAGAACACCTT
CATGGTTCTTGTGAACCTCCACCTTGAACTTCTCCTCCTTCTCTCCTCTCTTCAACTTGAGAAGCATGTTGTACTTTGCAGCCTCC
CCGGTGACCTCAGCGTTAGCATGAACAACCTCCTGGAGTTCATAAGGGAACAAGGAGTTAGACCTCTGCTGGATGGTCTTGACAGC
ATGATCAGCAACGTGCTGCACTTCTGGATCATCTCCTGGAACTTCCCTCCATCCAGATTCAAGCTCACCTTTCTTGCAGCCAAGAT
CGGAGGGAGTGATGGTATTGGTAGTAGAGGCACCACCATCATCACTAGCAGGCTTGAACTCCTGCAACTCCTTGAAGTTCAACCAA
GGCTTCACCCACACTTTGGCTTCGTAAAGCTTCTTCTTCCCAGCCTCGATGATCTCCAGCGTCAGGTGGTGCAGCGTTCCCGCCAC
GACTTGCTCTTTCGCCTTCACCACTCTCGCAAACTCTAGCAGTGCATTCTCTTTCTTGTTATGCTCATCGACAGCGAAACGAGCGA
GGCTCTCGACCTCGACGCTGTTCTCGTTAGCAGGTACATCGCGAACGCCTCCGAGCATGGCCATGTCGTCGTTGCAGAAAGTAGCG
ATCAGAGAGGGAATGAAGATGGAGGAGAGAGAGAAAACAACGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34340 unnamed protein product [Thellungiella halophila] | 1033 | 3e-110 |
| AAL59842 cysteine protease inhibitor CPI-1 [Brassica oleracea] | 1006 | 4e-107 |
| NP_850570 cysteine proteinase inhibitor 6 [Arabidopsis thaliana] | 981 | 3e-104 |
| ABK78689 cysteine proteinase inhibitor [Brassica rapa] | 974 | 2e-103 |
| AAA96316 cysteine proteinase inhibitor [Brassica rapa subsp. campestris] | 970 | 6e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H0X6 Cysteine proteinase inhibitor 6 | 981 | 1e-105 |
| Q0JNR2 Cysteine proteinase inhibitor 12 | 715 | 1e-074 |
| Q06445 Cysteine proteinase inhibitor | 350 | 2e-032 |
| Q41906 Cysteine proteinase inhibitor 3 | 330 | 4e-030 |
| P31726 Cystatin-1 | 329 | 6e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYX5 Cysteine protease inhibitor CPI-1 | 1006 | 3e-107 |
| A0T2P2 Cysteine proteinase inhibitor | 974 | 1e-103 |
| Q39268 Cysteine proteinase inhibitor | 970 | 4e-103 |
| B0YGH3 Proteinase inhibitor | 964 | 2e-102 |
| B9GX99 Predicted protein | 733 | 1e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12490.2 cysteine protease inhibitor, putative / cystatin, putative | 982 | 1e-106 |
| AT3G12490.1 cysteine protease inhibitor, putative / cystatin, putative | 930 | 1e-100 |
| AT2G40880.1 ATCYSA (CYSTATIN A); cysteine-type endopeptidase inhibitor | 330 | 4e-031 |
| AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative | 298 | 2e-027 |
| AT5G12140.1 ATCYS1 (A. thaliana cystatin-1); cysteine-type endopeptidase inhibitor | 280 | 2e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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