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Information for unigene UN17991

FASTA Sequence
Unigene ID: UN17991Length: 1364  SNP
GGATAGGTTTTAAAGCAGCTCAGCTCCGTCAATCTCCTCCTCCCTCCTCCTAATCTCTTCCACTCCCTCCTCCTAAACCAGAGCAT
CAAATGGCGCTTACCTTCTCAGATCTACACACAGAGCAGGGTGTCAAATCCGTAGAGGAGCACCTCGCCGGAAAAACCTACATCTC
CGGAGATCAGTTGTCTGTGGATGATGTGAAGGTATACGCTGCCGTTTCGGGGAAACCCAGCGATGCTTTCCCCAATGCTAGCAGGT
GGTACGATTGCGTCGCTTCCCACCTTGCTAAAAGTTTCCCTGGAAAAGCCGTTGGAGTGAGTATCGGTGGCTCTGCTGTTGCTGCT
CCTGCTCAAGCTGAGGCACCCGCTGCAGCTGAGGATGACGATGATGACATGGATCTGTTCGGTGATGAGACCGAGGAGGAAAAGAA
AGCTGCAGAGGAGAGGGAGGCTGCTAAGAAGGACACCAAGAAGCCTAAAGAGAGTGGAAAGTCCTCTGTGCTCATGGAAGTGAAGC
CATGGGATGATGAGACAGATATGAAGAAACTTGAGGAGTGTGTTCGTGCTGTTGAGATGCCTGGTCTTCTATGGGGAGCTTCGAAA
CTGGTTCCAGTTGGTTACGGTATCAAGAAGCTCACGATCATGCTCACAATTGTTGATGACCTCGTCTCCCCTGACAACCTCATTGA
AGACTATCTCACCAGTGAACCTAACAACGAGTACATCCAGAGTGTTGACATCGTTGCATTCAACAAGATCTAGAGACTTTAAAACC
TCTCCCTACCCCCACAAACAATACATTTGTTTTTCTTCAAGTTTTGTTCTTTTCTGCTGTTTGCTTGTTTCTAGTTGCAATACATC
TTTCATGTTACTAGAAACATAAACTATCAATACTTTTTTTATCCCTTGACATTGTCTTAAGAGACACTCAAGTACCGTGAAAAGTT
CTCTACAACTTCAGAAACAATCACGTATCCCGCAGCTCCCATCACAAGAGAAAGGGTGACTTTTCCTCCTGGGACAAGTTGCTGCG
AACTTGCTTTTGATGGTGAGACCACGTACCTATCTGACCAAGACATTGCAGCTGGTAGGATTCCGAACAACACCAGTACTCCATAT
GTCCCAGCAAAATCTAAAGCTTTGAAGAAAATCTCTGGGTCCAGTAGGGAGAGGACAACCGGAGGAACCAATGTAAGAAGGTAAAT
AAAAGGCTTGTTCTGTCTGGTCTGGAGCTTCAATAAATCAGAAAAAAAGTCAGTGAGGCCTAAGACAAATCCTATATAAGATGTTG
CGATTGCAATAAGAGAGAATGCTTCTACAAAAGGACCAACGGTGACACTGGTTGATCTTAACTGTTGCAGAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata]10507e-112
NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana]10311e-109
XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata]9531e-100
NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana]9361e-098
AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana]8633e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCX3 Elongation factor 1-beta 210315e-111
Q84WM9 Elongation factor 1-beta 19365e-100
P29545 Elongation factor 1-beta8147e-086
P29546 Elongation factor 1-beta7449e-078
P93447 Elongation factor 1-delta7035e-073

TrEMBL top hits (Blast detail)Scoree value
Q29PY2 At5g121109368e-099
A9P7W8 Predicted protein8329e-087
B9GEM9 Predicted protein8193e-085
B6SIK8 Elongation factor 1-beta7996e-083
B6SLK4 Elongation factor 1-beta7971e-082

Arabidopsis top hits (Blast detail)Scoree value
AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2)10323e-112
AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1)9373e-101
AT1G30230.2 elongation factor 1-beta / EF-1-beta6533e-068
AT1G30230.1 elongation factor 1-beta / EF-1-beta6462e-067
AT5G19500.1 tryptophan/tyrosine permease family protein6211e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1111  58%
 
72  11%
 
124  21%
 
82  11%

Unigene MembersMember information