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Information for unigene UN17993
| FASTA Sequence |
| Unigene ID: UN17993 | Length: 747 |
SSR | | AGAGAATAAAGAAGCACTCGAGTAATGCCAAAAGAAACTTTATTGCCTAAAACCCAGTAAAGGTAAAACACTTCATCAAATCCTCC
CTCCCTCCCTCACATTCAAGATTCAAGGTTCAAAAATCAACAACAACAACAACAATGCAGCAAACTTAGAGCTTGAGGAAAACAAA
CTCCTCGACCGCTGGGATCTCTCCAATCTTCTTAAGCGTCTCCTTGCTTGGCTGATCATCTACACCAATCGCCATGATCGCTTGCT
TCCTCGGCGCAATCCTCCCAACGCTCATGAAGTTAACATTCACATTAGACTCTCCAAGAATGCTACCCACCGTCCCAATCATACCC
GGCTGATCAACCTGCCTGCACAGTATGATACTACCTTCAAGAGTCACATCCACTTCAAAAGACCCAACCTTTGTCAAATGCGGGAT
TCCATCTTTAACCCTTCCTTCCACTTTCACCTCTCCTGACTCAGACAAGGAACTAGCGAACTTGGACTCCACGTTGCCTAGCTGAA
CAGTTATGGTCTCCAAGGGGTTCTCTGGCGACCCGTCCAAGAGCACACGCTCCTCCGAGAGTCTGAGACCTCTCTGCTTGGCTGTG
AAGTCAGCGTTGACCAAGTTGACGTATACGTCGGAGATCGGCTCGATGATTCCCCTTGGTGATCATGGCTCGGAGCAGTCTTGTGT
CGAGATCATCAGTGGCTCTTGCTGAGGTGTATGAGACTTTCACGTTCTTCACGCCGCTT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAM60833 Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] | 806 | 5e-084 |
| NP_195146 D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana] | 806 | 5e-084 |
| BAD94241 Phosphoglycerate dehydrogenase - like protein [Arabidopsis thaliana] | 806 | 5e-084 |
| XP_002867129 hypothetical protein ARALYDRAFT_491252 [Arabidopsis lyrata subsp. lyrata] | 805 | 7e-084 |
| XP_002883891 predicted protein [Arabidopsis lyrata subsp. lyrata] | 783 | 2e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04130 D-3-phosphoglycerate dehydrogenase, chloroplastic | 617 | 2e-063 |
| P73821 D-3-phosphoglycerate dehydrogenase | 142 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O49485 Phosphoglycerate dehydrogenase-like protein | 806 | 3e-084 |
| Q56WY7 Phosphoglycerate dehydrogenase-like protein | 806 | 3e-084 |
| Q8LGJ6 Phosphoglycerate dehydrogenase-like protein | 806 | 3e-084 |
| D2D316 Phosphoglycerate dehydrogenase | 752 | 6e-078 |
| B9RYA3 D-3-phosphoglycerate dehydrogenase, putative | 740 | 2e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34200.1 EDA9 (embryo sac development arrest 9); ATP binding | 807 | 2e-086 |
| AT3G19480.1 D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative | 691 | 5e-073 |
| AT1G17745.1 PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase | 618 | 1e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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