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Information for unigene UN17995
| FASTA Sequence |
| Unigene ID: UN17995 | Length: 1177 |
SSR | SNP | GGACTCCAGTGACAAGACACACAACTCTCAATCTGACCAGACATTCACCCTATCAGGATTCAGAAAGAAGAAGAAGAAGATGGAGA
TAACCCTGAACAGTGGCTACAAGATGCCGATCGTGGGCTTAGGAGTGTGGAGAATGGAGAAAGAAGGGATTCGAGACCTCATCATC
AACTCCATCAAGATCGGCTACCGCCACCTCGACTGTGCTGCTGATTATAGGAATGAAGCTGAAGTTGGTGAGGCTCTCTCAGAAGC
ATTCAAGACTGGTCTAGTCAAAAGAGAGGATCTCTTCGTTACAACCAAGCTGTGGAATTCAGACCATGGACATGTAATTGAGGCAT
GCAAGGACAGTCTGAAGAAACTTCAACTTGATTATCTCGACCTTTACCTCGTTCATTTCCCCGTTGCAACTAGGCACACTGGTGTT
GGAACCACGGACAGTGCTTTGGGCGATGATGGAGTATTGGACATAGATACGACCATCTCTCTTGAAACTACATGGCATGACATGGA
AAAGCTTGTTTCTATGGGTCTCGTCCGCAGCATTGGAATCAGTAACTATGACGTATTTCTAACGAGGGATTGCTTGGCTTATTCCA
AGATCAAGCCAGCGGTGAATCAGATTGAGACGCATCCTTACTTTCAACGCGACTCTCTTGTAAAATTCTGCCAGAAGCATGGTATT
TGTGTCACAGCTCATACTCCTCTCGGAGGTGCCACGGCCAATGCAGAGTGGTTTGGTACCGTCTCATGTCTCGATGACCCAGCTCT
CAAAGAAGTGGCGGAGAAGTACAAAAAGACAGTGGCACAGGTGGTGCTGAGGTGGGGAATACAGAGGAAGACAGTGGTGATACCAA
AGACATCCAAGGCTGAGAGGTTGGAAGAGAATTTCAAGGTTTTCGACTTCGAGCTGACGAAAGAGGACATGGAGGTGATCAAGAGC
ATGGACAGGAAGTACCGTACGAACCAACCGGCCAAGTTTTGGGGGATTGATCTCTACGCTTGAATGAATAGAATGATCACCACCGC
TCTTGTCTCTCTCATGAATAAGAGAAGAAGCTAAGGCGTTTAGCTTCTTCACCTGTGGGACATTCTCAATGGTTGTGAACCTATTT
TATTTAAAACTCGTATGTTGAACATGTTATGGTTTTTAATATCACTCACATTTGATTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880370 hypothetical protein ARALYDRAFT_480985 [Arabidopsis lyrata subsp. lyrata] | 1576 | 6e-173 |
| NP_179721 NAD(P)-linked oxidoreductase domain-containing protein [Arabidopsis thaliana] | 1562 | 2e-171 |
| AAM64779 putative NADPH dependent mannose 6-phosphate reductase [Arabidopsis thaliana] | 1548 | 1e-169 |
| NP_179722 aldose-6-phosphate reductase (NADPH2) [Arabidopsis thaliana] | 1505 | 1e-164 |
| AAM63341 putative NADPH dependent mannose 6-phosphate reductase [Arabidopsis thaliana] | 1490 | 5e-163 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P28475 NADP-dependent D-sorbitol-6-phosphate dehydrogenase | 1219 | 6e-133 |
| Q6IMN8 Aldose reductase A | 626 | 3e-064 |
| P15122 Aldose reductase | 619 | 2e-063 |
| A1CRI1 Probable NAD(P)H-dependent D-xylose reductase xyl1 | 606 | 7e-062 |
| C5FFQ7 Probable NAD(P)H-dependent D-xylose reductase xyl1 | 606 | 7e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SJV2 Putative NADPH dependent mannose 6-phosphate reductase | 1562 | 2e-171 |
| Q8LBG6 Putative NADPH dependent mannose 6-phosphate reductase | 1548 | 7e-170 |
| Q9SJV1 At2g21260 | 1505 | 7e-165 |
| Q8LD92 Putative NADPH dependent mannose 6-phosphate reductase | 1490 | 4e-163 |
| B9RG54 Aldo-keto reductase, putative | 1436 | 7e-157 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G21250.1 mannose 6-phosphate reductase (NADPH-dependent), putative | 1563 | 7e-174 |
| AT2G21260.1 mannose 6-phosphate reductase (NADPH-dependent), putative | 1506 | 3e-167 |
| AT2G21250.2 mannose 6-phosphate reductase (NADPH-dependent), putative | 1203 | 4e-132 |
| AT2G37770.2 aldo/keto reductase family protein | 557 | 3e-057 |
| AT2G37790.1 aldo/keto reductase family protein | 541 | 2e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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