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Information for unigene UN18027
| FASTA Sequence |
| Unigene ID: UN18027 | Length: 837 |
SSR | | TTCATCGTTGTTCTCTCTCTCTCCTCAATCTTCATTCCCTCTCTGATCGCTACTTTCTGCAACGACGACAACATGGACATGCCCGG
AGCCGTTCGCGATGTACCTTCTAACCAGAACAGTGGCGAGGTCGAGAGCCTCGCTCGCTTCGCTGTCGATGAGCATAACAAGAAAG
AGAATGCGCTTCTAGAGTTTGGGAGAGTGGTGAAGGCGAAAGAGCAAGTTGTGGCGGGAACGCTGCACCACCTGACTCTGGAGATC
ATAGAGGCTGGGAAGAAGAAGCTTTACGAAGCCAAAGTGTGGGTGAAGCCTTGGTTGAACTTCAAGGAGTTACAGGAGTTCAAGCC
TGCTACTAGTGATGATGGTGGTGCCTCTACTACCAATACCATCACTCCCCTCCGATCTTGGCTGCAAGAAAGGTGAGCTTGAATCT
GGATGGAGGGAAGTTCCAGGAGATGATCCTGAAGTGCAGCACGTTGCTGATCACGCTGTCAAGACCATCCAGCAGAGGTCTAACTC
CTTGTTCCCTTATGAACTCCAGGAGGTTGTTCACGCTAACGCTGAGGTCACTGGGGGAGGCTGCAAAGTACAACATGCTTCTCAAG
CTTGAGAGGAGAGAAGGAAGAGAAGTTCAAGGTGGAGGTTCACAAGAACCATGAAGGTGTTCTTCATCTCAACCACATGGAGCAAC
ACCATGACTAGTTCTCTTCTCCTCTCCTCTGCTTATGTAATATTTTGACTGTTTGCTTGCTTTGTAAGATATTTTAACTTCTGATG
CAACTACTAACCCTTAAAATAACATACCAGAAGGAATAAATTAAAAGTTACAGTCTTTGATTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAL59842 cysteine protease inhibitor CPI-1 [Brassica oleracea] | 548 | 5e-054 |
| BAJ34340 unnamed protein product [Thellungiella halophila] | 524 | 3e-051 |
| ABN42208 proteinase inhibitor [Cakile maritima] | 523 | 4e-051 |
| NP_850570 cysteine proteinase inhibitor 6 [Arabidopsis thaliana] | 517 | 2e-050 |
| AAG31653 PRLI-interacting factor M [Arabidopsis thaliana] | 487 | 6e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H0X6 Cysteine proteinase inhibitor 6 | 548 | 2e-055 |
| Q0JNR2 Cysteine proteinase inhibitor 12 | 373 | 5e-035 |
| Q06445 Cysteine proteinase inhibitor | 332 | 3e-030 |
| Q41906 Cysteine proteinase inhibitor 3 | 329 | 6e-030 |
| P31726 Cystatin-1 | 306 | 3e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYX5 Cysteine protease inhibitor CPI-1 | 548 | 4e-054 |
| B0YGH3 Proteinase inhibitor | 523 | 3e-051 |
| A0T2P2 Cysteine proteinase inhibitor | 480 | 3e-046 |
| Q1L0Q7 At3g12490-like protein | 473 | 2e-045 |
| Q39270 Cysteine proteinase inhibitor | 436 | 3e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12490.2 cysteine protease inhibitor, putative / cystatin, putative | 549 | 2e-056 |
| AT3G12490.1 cysteine protease inhibitor, putative / cystatin, putative | 515 | 1e-052 |
| AT2G40880.1 ATCYSA (CYSTATIN A); cysteine-type endopeptidase inhibitor | 329 | 5e-031 |
| AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative | 298 | 2e-027 |
| AT5G12140.1 ATCYS1 (A. thaliana cystatin-1); cysteine-type endopeptidase inhibitor | 261 | 4e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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