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Information for unigene UN18035
| FASTA Sequence |
| Unigene ID: UN18035 | Length: 1552 |
SSR | | CCTCTCCATATTTCCCTGAATCGTTTCCTTTTTTGACGCACAACAAACCCAAAATTGGTTAGGTTCTTGCTTACAATTTTTCCAGA
GAAATTCAGTATCTTTCCTCGGAGGTATAAGTAAGTTCATAATTGTCTGAAGAAGAAAAAGAAGAAGAGTCACACAGAAACAAAAG
TGTGGTCCCTTTCTTACTTGTGTTTCAAAAATATCTCATATCTTTCCCATGTAGAAGTAGCTTTCCCATATCTTATTCTCTGATTC
AGAATCTCATTACAAGATAGAACTATTTAGAAGAAGAAGAAGAAGATGGAGAATGAAAGTATAAAGTACTTACCTTTGGGTCAGAG
CGATCCCTTTGGCAACGAAGGAACCATCGGCGATCTCCTCGGCAGATTCTGCAACAACAACCCTCCTCAAGAGATCTCCCTCATCT
CACCTGCTGGGATCCGCTTCCCTCCTTATCCGGGGGGTCACTTCGGATCCGATCAGCTAACAGGACAAGACAGCAACAAGAGCTCC
TTGCTGGATCCACCAGATTCGGATCATCGAGTTCAGACACCGAAACCAAACTCCAGGAAGAGAAAGTCTATCCCTGTTTCTGTTTC
TGGAGGTAATGGCAAGGACTCTCCTGCTTCCTCCTCTCTCACAGCTTCCAATTCTAAGGTTTCAGGAGGAGAGATTGTTGGATCCA
AGAGAAGCAAGCAGGATGAAGCTGGAAGCAGCAAGAACGTAATAGACAATAAGGATGATGCAAAGCCTCCTGAGCCCCCCAAAGAT
TACATTCATGTTAGGGCTAGAAGGGGTCAAGCAACAGATAGCCACAGCCTCGCTGAAAGAGCAAGAAGAGAGAAGATCAGCGAGAG
GATGACTTTGCTTCAGGATCTGGTTCCTGGTTGCAACCGGATAACTGGGAAAGCAGTTATGCTTGATGAAATCATCAACTATGTGC
AGTCCTTGCAGAGACAAGTCGAGTTCTTGTCGATGAAGCTGGCTACTATAAATCCAAGGATGGAGTTTAACCCTAATGCTGCTTTA
TCCACAGAGATGATTCAACCGGGAGAGTCATTAACGCAGTCTCTTTACACAATGGCTTGCTCAGAGCAAAGAATCCCATTTGGATA
CTATTTTCTTGCCAAGAACATCCCTAGATTTTCAGACACGCAATTCCCCTTTAGTGATGGATTTGTTCAAGCTGAGCCACAGGGAT
TTTGGGAAAATGATTTGCAAAGCGTTGTTCAGATGGGTTTTGGAGATGTCCAGCAACAGAGCAGCAACAACAACAGTTGTTTTGAG
CCAACACTACAGATGAAACTTGAGCAATGATTCAAGAAGGTGTTTGTTATTGTATCTCTCTGTACATACAGAAACCAAGTAGTTGA
TGGGTACGGAGTGAATCATGTGGGAAACTAATGTTTACTATCGTTTTTTCTTTGCTTGCTTGTGCATCTGTTCATTTCTTCCCAAC
CCAAAGAAACCAAAAAAAAATCTTTATATTATTATATGTAAAAACGACAAGAATCTTTTTTGGACCATCTCTGTATTATTTTACAA
CTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885587 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1164 | 5e-125 |
| NP_189011 transcription factor bHLH77 [Arabidopsis thaliana] | 1151 | 2e-123 |
| CAN73299 hypothetical protein VITISV_005183 [Vitis vinifera] | 537 | 2e-052 |
| CBI17295 unnamed protein product [Vitis vinifera] | 537 | 2e-052 |
| XP_002264969 PREDICTED: hypothetical protein [Vitis vinifera] | 536 | 3e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK48 Transcription factor bHLH77 | 1151 | 7e-125 |
| Q9CAA9 Transcription factor bHLH49 | 457 | 2e-044 |
| Q9FJL4 Transcription factor bHLH78 | 437 | 4e-042 |
| Q9SRT2 Transcription factor bHLH62 | 423 | 2e-040 |
| Q6NKN9 Transcription factor bHLH74 | 390 | 1e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5AD41 Putative uncharacterized protein | 537 | 2e-052 |
| B9IAB6 Putative uncharacterized protein | 524 | 5e-051 |
| Q2A9V1 BHLH transcription factor, putative | 522 | 9e-051 |
| B9RRL5 Transcription factor, putative | 496 | 1e-047 |
| B9GND5 Predicted protein | 482 | 4e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G23690.1 basic helix-loop-helix (bHLH) family protein | 1151 | 6e-126 |
| AT1G68920.3 basic helix-loop-helix (bHLH) family protein | 465 | 2e-046 |
| AT1G68920.1 basic helix-loop-helix (bHLH) family protein | 457 | 2e-045 |
| AT1G68920.2 basic helix-loop-helix (bHLH) family protein | 457 | 2e-045 |
| AT5G48560.1 basic helix-loop-helix (bHLH) family protein | 437 | 4e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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