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Information for unigene UN18037

FASTA Sequence
Unigene ID: UN18037Length: 1556 SSR 
GAGCTCACACGTGCAGATCAATATCACAATTTTCTATGATGGCTTCGATGACCATGACATCTTCATTTCTCCCGGCCCTCTCAAAG
CTACCAGCAACCATCTCTGGTAACAACAGACAAAGCCTCACTGTGGTCAAAGCCTCCACCAGCGATAACACAACCAAGCAAGAACA
GAGCATGAAGATGAGGAGGGATCTAATGTTCACGGCTGCAGCTGCGGCTGTGTGCACCTTAGCCGAAGTGGCCATGGCAGAAGAAG
AAGAACCCAAGAGAGGGACAGAAGCAGCCAAGAAGAAGTATGCTCCTGTCTGTGTCACAATGCCTACCGCCAAGATTTGCCGTAAC
TAAATTCACTATTTTCACCAACTAAACTATATATATATATATATATATCAACTCCATGTGTCTCTTGTTTTGTGTCTATCAAATAT
TCTCAGTCAGTATGTAATGATCATAGTTGATCAAATCTATTAAAAAAACCTCTGTTAAGTGTACTTTAATCGTCCACTGTTGTCAG
CAAATACTTCTACTCAACCTTTGGCTACAAATCTTTACACTCTCAATAAGAGCCATATGATCCAATAATAATGCAATATTTGGGAT
TAAATCATGAGGTTTGAATAAGAATAAACAGCATAAAGAAGGCTGACAAGTTCATGAGAAGACAAAGGTAATGCGCCTCTGGTTTT
ATTCTTCTTGTGTATACTGAAGAGTTGCTTCTGTTACTCTACTCCAGTGGCCCAGACGAAGTTCCCTCCTCTTCACCATCAAACTC
TTGCTCAACACCTTTGACCTCGGATATATAATGCATCAGCATATTCTCAATCCCTGATTTCAAAGTAACAGATGAACTTGGACAAC
CGCTACAAGCTCCTTGCATTCGAAGCTTAACTATCCCAGTTTCCGTATCAAACCCACAATACTCAATGTCTCCTCCATCATCTTGG
ACTGATGGTCGGATGCGAGTCTCCAAGAGTTCCTTGATCATTGCTACAGTTTCAGAGTCATCGTCGTTAACGGCAGTATCCTTGGC
AGCTGCAACTTGTGAGTCTAGAAACAAAGGCTGGCCAGAGGAGTAGAAGTCCATTACCACTGCAAACACTTCAGGCTTGAGGAAGT
CCCATGTCACGTCGTCTGACTTTGTCACAGTGACAAAATCCGATCCGAAGAAAACTCTAACAACACCATCAATGGAGAAGATGGCT
TTTGCCAAAGGTGAAGTCATAGCTGAACGAGAATTAGGGAAGTCTGCGCTTCCCACTTCCATGACTGGTTTACCAGGACTAAACAT
CAGAGAAGAAGGGTTTGGTGTTGACTGTGTTTGTATAAACATCGTCCTCCTTTGCACTCCCAGTGAGATCGATTTGAGGACAACAA
GGCGAAGAAAAGACCTCGCGAGCTCTATGTCTCGAAAGAGAATTCAGAAACCTCGTTATCCCTTTCATCGTTTCCCTACGTTTTTC
CAGATTCTAAAGATTTAAGCTTTATTCGGAGAATCGCAAATCGGATAGGCGAAGGAAGAAACAAGCTAATTCGTGTCGTGGGAATG
GTGATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175550 NifU-like protein 5 [Arabidopsis thaliana]10086e-107
XP_002891637 hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp. lyrata]10032e-106
NP_566673 NifU-like protein 4 [Arabidopsis thaliana]9531e-100
BAJ94768 predicted protein [Hordeum vulgare subsp. vulgare]9012e-094
XP_002264979 PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera]8958e-094

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8J2 NifU-like protein 5, mitochondrial10083e-108
Q9LIG6 NifU-like protein 4, mitochondrial9536e-102
B3NYF7 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial5872e-059
B4PZ52 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial5872e-059
B4IMF6 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial5862e-059

TrEMBL top hits (Blast detail)Scoree value
B9HVY4 Predicted protein8912e-093
B9SG71 HIRA-interacting protein, putative8883e-093
C5Z0J5 Putative uncharacterized protein Sb09g0043108883e-093
Q5WMY1 Os05g0155300 protein8858e-093
A2Y0K2 Putative uncharacterized protein8812e-092

Arabidopsis top hits (Blast detail)Scoree value
AT1G51390.1 NFU5; ATP binding / structural molecule10092e-109
AT3G20970.1 NFU4; structural molecule9535e-103
AT3G20970.2 NFU4; structural molecule6946e-073
AT1G51400.1 photosystem II 5 kD protein4123e-040
AT3G21055.1 PSBTN (photosystem II subunit T)3577e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
196  50%
 
91  8%
 
102  17%
 
113  25%

Unigene MembersMember information