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Information for unigene UN18037
FASTA Sequence |
Unigene ID: UN18037 | Length: 1556 |
SSR | | GAGCTCACACGTGCAGATCAATATCACAATTTTCTATGATGGCTTCGATGACCATGACATCTTCATTTCTCCCGGCCCTCTCAAAG
CTACCAGCAACCATCTCTGGTAACAACAGACAAAGCCTCACTGTGGTCAAAGCCTCCACCAGCGATAACACAACCAAGCAAGAACA
GAGCATGAAGATGAGGAGGGATCTAATGTTCACGGCTGCAGCTGCGGCTGTGTGCACCTTAGCCGAAGTGGCCATGGCAGAAGAAG
AAGAACCCAAGAGAGGGACAGAAGCAGCCAAGAAGAAGTATGCTCCTGTCTGTGTCACAATGCCTACCGCCAAGATTTGCCGTAAC
TAAATTCACTATTTTCACCAACTAAACTATATATATATATATATATATCAACTCCATGTGTCTCTTGTTTTGTGTCTATCAAATAT
TCTCAGTCAGTATGTAATGATCATAGTTGATCAAATCTATTAAAAAAACCTCTGTTAAGTGTACTTTAATCGTCCACTGTTGTCAG
CAAATACTTCTACTCAACCTTTGGCTACAAATCTTTACACTCTCAATAAGAGCCATATGATCCAATAATAATGCAATATTTGGGAT
TAAATCATGAGGTTTGAATAAGAATAAACAGCATAAAGAAGGCTGACAAGTTCATGAGAAGACAAAGGTAATGCGCCTCTGGTTTT
ATTCTTCTTGTGTATACTGAAGAGTTGCTTCTGTTACTCTACTCCAGTGGCCCAGACGAAGTTCCCTCCTCTTCACCATCAAACTC
TTGCTCAACACCTTTGACCTCGGATATATAATGCATCAGCATATTCTCAATCCCTGATTTCAAAGTAACAGATGAACTTGGACAAC
CGCTACAAGCTCCTTGCATTCGAAGCTTAACTATCCCAGTTTCCGTATCAAACCCACAATACTCAATGTCTCCTCCATCATCTTGG
ACTGATGGTCGGATGCGAGTCTCCAAGAGTTCCTTGATCATTGCTACAGTTTCAGAGTCATCGTCGTTAACGGCAGTATCCTTGGC
AGCTGCAACTTGTGAGTCTAGAAACAAAGGCTGGCCAGAGGAGTAGAAGTCCATTACCACTGCAAACACTTCAGGCTTGAGGAAGT
CCCATGTCACGTCGTCTGACTTTGTCACAGTGACAAAATCCGATCCGAAGAAAACTCTAACAACACCATCAATGGAGAAGATGGCT
TTTGCCAAAGGTGAAGTCATAGCTGAACGAGAATTAGGGAAGTCTGCGCTTCCCACTTCCATGACTGGTTTACCAGGACTAAACAT
CAGAGAAGAAGGGTTTGGTGTTGACTGTGTTTGTATAAACATCGTCCTCCTTTGCACTCCCAGTGAGATCGATTTGAGGACAACAA
GGCGAAGAAAAGACCTCGCGAGCTCTATGTCTCGAAAGAGAATTCAGAAACCTCGTTATCCCTTTCATCGTTTCCCTACGTTTTTC
CAGATTCTAAAGATTTAAGCTTTATTCGGAGAATCGCAAATCGGATAGGCGAAGGAAGAAACAAGCTAATTCGTGTCGTGGGAATG
GTGATCCC
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GenBank top hits (Blast detail) | Score | e value |
NP_175550 NifU-like protein 5 [Arabidopsis thaliana] | 1008 | 6e-107 |
XP_002891637 hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp. lyrata] | 1003 | 2e-106 |
NP_566673 NifU-like protein 4 [Arabidopsis thaliana] | 953 | 1e-100 |
BAJ94768 predicted protein [Hordeum vulgare subsp. vulgare] | 901 | 2e-094 |
XP_002264979 PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera] | 895 | 8e-094 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9C8J2 NifU-like protein 5, mitochondrial | 1008 | 3e-108 |
Q9LIG6 NifU-like protein 4, mitochondrial | 953 | 6e-102 |
B3NYF7 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 587 | 2e-059 |
B4PZ52 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 587 | 2e-059 |
B4IMF6 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 586 | 2e-059 |
TrEMBL top hits (Blast detail) | Score | e value |
B9HVY4 Predicted protein | 891 | 2e-093 |
B9SG71 HIRA-interacting protein, putative | 888 | 3e-093 |
C5Z0J5 Putative uncharacterized protein Sb09g004310 | 888 | 3e-093 |
Q5WMY1 Os05g0155300 protein | 885 | 8e-093 |
A2Y0K2 Putative uncharacterized protein | 881 | 2e-092 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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