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Information for unigene UN18039

FASTA Sequence
Unigene ID: UN18039Length: 624 SSR 
GGAAAAGTTTCGTAGGTTCTAGGGTTTTAGTTGTTTCTCTTCTCGGAAAAAGAAAAGAAGAAGACATGTCGGCAGTTTCTAGGGTT
TTCGGAGGATGCAGGACACTGATGGCAAAGGCGGCGAATAATGCGGCGGCGGCGGCGGCAGCAAGCGGTGGAGCTGGTAAAGAAGG
AAAAGGGATACTCAAGACAGTTCCGGTCTCACAGACGCTGGCTAGCTTCGCCGGAGAAAGCGAGCTCTCTCGTGCCACCGCCGTGA
AGAAAGTGTGGGAGCATATCAAGGGAAACAACCTCCAGAATCCAGAAAATAGGAAGCAGATCATATGCGACGATAAGTTGAAGACA
ATCTTCGGTGACAAAGACACAGTTGGATTCACAGAGATCGCAAAGCTCTTGTCCCCACATTTTCCCAAGTCTGTCTAATTTGGTGA
TGTAGTCTCATTATCATATTAGTTTGCTATCTTTTGGTTCGTTTTTGATGTATATGAAAAAGAAGCAAAACTATGCTTGATCCATC
AGTAAGTGGAATATTTATGTATTCTGACAATTGTTTTTTTATCATGATCTTGTTTGGTTTGGGATCTTTTTGATATTTGGTGGTGT
TTGAGTCTTCATTTGGTCGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879559 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]3753e-034
XP_002893684 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]3744e-034
NP_564382 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]3583e-032
NP_565810 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]3493e-031
AAQ24534 SWIb domain-containing protein [Solanum chacoense]3208e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q08747 Upstream activation factor subunit UAF301734e-012
Q05024 Protein TRI11582e-010
O74503 Upstream activation factor subunit spp271555e-010

TrEMBL top hits (Blast detail)Scoree value
Q9C504 At1g317603582e-032
Q93W30 Expressed protein3492e-031
Q6V9I4 SWIb domain-containing protein (Fragment)3205e-028
Q6Z6Y2 Os02g0130000 protein2812e-023
A2X0H7 Putative uncharacterized protein2802e-023

Arabidopsis top hits (Blast detail)Scoree value
AT1G31760.1 SWIB complex BAF60b domain-containing protein3779e-037
AT2G35605.1 SWIB complex BAF60b domain-containing protein3761e-036
AT3G48600.1 SWIB complex BAF60b domain-containing protein2748e-025
AT3G03590.1 SWIB complex BAF60b domain-containing protein2399e-021
AT4G34290.1 SWIB complex BAF60b domain-containing protein2381e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  80%
 
71  20%

Unigene MembersMember information