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Information for unigene UN18040

FASTA Sequence
Unigene ID: UN18040Length: 1388 SSR 
GGAAAGAAACTGAGAATGTAAACAAACCATGTACAAAACAAAAAAAGCCCTAAATTGGTCAGGAACATCCACCTTATTCCAATTAA
AAACTTTACATTGAGAAAGTTAAAAAAAGAAATAAAAACCAAAGAGACAAGTCAGAGACTAAATTTGTGCATCTATGTCGTCAGAA
TCTTACAACAATACACAAAGGGGAAGAGAGATAGATAGATAGAGAGAGAGAGGATCTGCAAAGCACATTTTGATTAGAGAAGCAGC
ACAGACTCTGGTTTAGGCAGAGCCAGTGTTGTCTCCATGTGTTGCTGTGACCAGTAGCCGTGAGCGTTCAAGACACGGTTTAGAAG
TTCCTGCGGCACTGGCTCTCCTCTCCTCTGCTGTGGCGATATCTTAGCTGTATGGACCAGCGTTTTCCACTTGTCCTTGAGATCAA
CGTAAGTGCGGTGGTCTGCATCTTCGAAAGCACTATGCTTAACATCTCTCCACCTTCCAGTACCGAGTTTCTCAACAGCTTGAACA
AGTGCTTCTACTTCAGTAACAGAGAAAGGTCGACGCATTCTTCGCTGTGCAGTCTGATTCTGATGCTGCTGCTGCTTAGATTTATG
ACGAGGCGGTAGAGGAGACAGTTCGGTGAGCGCAGCAGGAGCAGCAGGAACCAGAGCTTTAGAAACATCTGTTGCGGTTTCCTTGT
CAAACGAGTGAGATGGGTACAGTGCTAAATCATGCTCAGATTTGAACACGGTGTCCATGTCAGAAGCATGGCATATAGGCAGTTCC
TCGCAGACATGTCCCAACGGGTTACTAGATAACAGATGAGGCGCTTCTGAGCTGGGTTCGAGGCTGAAATCAAGAGAGTCCAAGTG
GGTGTTATCCTGAGAGATCCCAGTCTGATGAAGTGTTTTGTTATCATCTCTGACTTTCTTCCCTTGAACCATCAGACCAACTCTGT
GTCCATCGCTCAATAAAGTGCTCACTGCTTCCATCACCATTCTCTTCAAGGAGCCAACAGTAGCGGTTTCTGGAATCTCTACAAAT
AGCTCAGGCACCCTGAATGACTTGATTCGCAGTCTCACATGAGAGTCGCTTGAGACAAAGGATGCACCTGGACCTTTCATAGTAGT
AACAGTTCTGCTGCCTCTTTGCATCTTAGAGCGCAGACGATAATCATCAGACACAGAATCAGATATGTGTTCAAAGTATTTCCTTT
TCTTGATAGGATAGCTCCTCTGATGGTGCAAGTAATAACTTCTCCATGATTTTGCTTCTGAATGTCTTGAACCTCCTTTCCAGTGT
CTAGAAGCCAATATCTTCCTGATTCTTCTGTCTCCAACACGCGGCACAGACCTAGGTGGTTTTTTGGTAACACGAGGGCATATATA
CCCAGAAAAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB50690 telomere repeat-binding protein TRP1 [Arabidopsis thaliana]14602e-159
NP_200751 Telomere repeat-binding protein 1 [Arabidopsis thaliana]14602e-159
NP_001078771 Telomere repeat-binding protein 1 [Arabidopsis thaliana]14602e-159
NP_001078770 Telomere repeat-binding protein 1 [Arabidopsis thaliana]14602e-159
BAH19498 AT5G59430 [Arabidopsis thaliana]14602e-159

Swiss-Prot top hits (Blast detail)Scoree value
Q8L7L8 Telomere repeat-binding protein 114608e-161
Q9SNB9 Telomere repeat-binding protein 212287e-134
Q6R0E3 Telomere repeat-binding protein 57376e-077
Q9C7B1 Telomere repeat-binding protein 37205e-075
Q9LL45 Telomere-binding protein 15736e-058

TrEMBL top hits (Blast detail)Scoree value
A2XB20 Putative uncharacterized protein5756e-057
B9T8J2 Putative uncharacterized protein5182e-050
B9GJM2 Predicted protein4904e-047
B9HPG4 Predicted protein (Fragment)4672e-044
B5TFM6 Putative double-strand telomere binding protein 24538e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G59430.1 TRP1 (TELOMERIC REPEAT BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding14607e-162
AT5G59430.2 TRP1 (TELOMERIC REPEAT BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding14607e-162
AT5G59430.3 TRP1 (TELOMERIC REPEAT BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding14607e-162
AT5G59430.4 TRP1 (TELOMERIC REPEAT BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding14607e-162
AT3G46590.1 TRFL1 (TRF-LIKE 1); DNA bending/ DNA binding / telomeric DNA binding12295e-135

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
111  25%
 
191  25%

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