 |
Information for unigene UN18043
| FASTA Sequence |
| Unigene ID: UN18043 | Length: 1578 |
SSR | | ACATTGCACTTGTTTTTTTGGTAGAAGATAACAAAAAGCACAGTTGTTACTTTGACCGATTGAATAATTTTCCAACAGCCAAATAC
AGTTACTGGGGGCTAGTACAAATACAAACACAATGAAAAAAGAAAAAGCAAACAAAAGAGAACCCCAATAATCACGCAACTACTTC
CTTTGATGTTGTTTCTGCTATCATTCCAGCCCAAAGTCCCATCACTCCCAAGTTTGCTTTGTAGCCAAGAAGGTACCCAAAGGGAA
GGCCAAAAATGTAGTAACAACCCAAGTTGATATAAGCCACTAAACCTTGTCAACCACCTCCAATAGCCACACCGGAAATAACTGGC
TGCACGCTGTTGAGAACCATTGTTATACCGAGAAGATAAGCTAGCTTAAACACTGCACGTTGAAGTACTTCGCTGTTCGTGAAGAT
GATAGCAAAATGGTCTCTGGCTATGATGATAGCCACCATAAAGACAAGACCTATGAGGAGAGACTGGAACACCGTTACATAGACAG
AGTATTTTGCTGCTCGTGGTCGGCCTAAGCCAAGCTCATTGGAGACACGGACACTTATAGCTGCGTTTATTCCAATAAACAACATT
GCTTCCAAGCCATTGAGATTCATGCATATAGAAAGGGAACCAACAGCGATAACAGCGTTGTCAAGGTGACCAGTGAGGACGATGAT
ACTCATCATATACCACATTTCAAGACAAAGCATAACCGCAGATGCAATGGAGAGTCTAACAAAGGCCCAAATCTCTTTAAACGCCA
ACCAAGATAAACCCGTCCAGCCATCATTACACCAACCAATCACATAAACGATCTGAGAGATTGCAATTCCCCAGTTTGTGATATTA
AAAGCCAAAGCTGCACCGTTTGTTCCCAAACCAAACACGATGATAAACAGCCACAGCATACCAACGTGCAGGAGAAGAGCAATGAA
TCCTATCCAAGCAATGACGGTTACTTTGCTCTGCGCTTGGAGGAACTTGGAGGTGGGGAAGTTGAAAGCCATCGAGAAGAGCTGAG
GGATGGTGAGGAGAGTGAACTGTCCAGCTGGAACGGCTATCTCCTCTGCTTGGCCGAGAAGTCTCAGAACCGGAGTGGCAAAGATG
TAAATAGGAAGGAGGAAGAGGCAGGAAACGAACAAGATGATCCAAGATCTCTGCATATAAACGCCTAACATGTGGACTTGACCTGC
TCCAAATGCTTGTCCACAGAGGGTTTCAAGTGCACTTCCCATGCCAAGCAGAAAGCCGAAGGAGAAGGTGCCGATGACGGAGAGAG
AGATGGAGACAGCGGAGAGCTCGATCTCGCCGATGTGGCCGACGAAGATGTTGGTGACGGAGCTGACACCATACTGGCAAATGACG
TTGAAGCCCACCGGAGCAGCGATCAACCACATTTTCGCCGACTCCGTACACAAAACTCGCTTCACATCACTCCAAGTTCTCGCCGG
AGCGTAATCTTCCTCTACCTCGCCACCGTGCGGAAGAAGCGGTGTCGTATTATCCATCTCCTACGAGTCTCAAAACCCCACTATCT
TCTCTGTCTCTCTCTCTCTGTGTTAGTCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867601 mate efflux family protein [Arabidopsis lyrata subsp. lyrata] | 2115 | 3e-235 |
| NP_194294 detoxifying efflux carrier 35 [Arabidopsis thaliana] | 2104 | 5e-234 |
| NP_001190838 detoxifying efflux carrier 35 [Arabidopsis thaliana] | 2104 | 5e-234 |
| BAE98568 hypothetical protein [Arabidopsis thaliana] | 2093 | 9e-233 |
| BAJ33972 unnamed protein product [Thellungiella halophila] | 2080 | 3e-231 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYT3 Protein TRANSPARENT TESTA 12 | 802 | 2e-084 |
| Q96FL8 Multidrug and toxin extrusion protein 1 | 461 | 7e-045 |
| Q5RFD2 Multidrug and toxin extrusion protein 1 | 454 | 4e-044 |
| A1L1P9 Multidrug and toxin extrusion protein 1 | 453 | 6e-044 |
| Q3V050 Multidrug and toxin extrusion protein 2 | 445 | 5e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWD0 Putative uncharacterized protein At4g25640 | 2093 | 6e-233 |
| Q9SZZ2 Putative uncharacterized protein AT4g25640 | 2060 | 4e-229 |
| B9RIU7 Multidrug resistance pump, putative | 1781 | 1e-196 |
| Q6V7U8 Putative anthocyanin permease | 1647 | 3e-181 |
| B9GQB0 Predicted protein (Fragment) | 1640 | 2e-180 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
