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Information for unigene UN18071

FASTA Sequence
Unigene ID: UN18071Length: 1071 SSR 
GGCTCAAAAGGCGTAGCTTGAAAGCTGTTGAAATCGAATCGGAGAAGAGAAGAGATGGCTGAGGAACACAAACACGACGAATCTGT
GACGGCGCCGGAGCCAGCTGTGGAGATCGTGGAGAGGGAGTCGTTGATGGATAAGATAACGGAGAAGATCCACCACGGTGGCGATT
CCTCTTCGTCGTCTTCATCGTCTGATGACGAGGACGATAAGAAGAAGAAGAAGAAGCCGGAGTCTCCGTCTTCTGTGAAATCAAAA
GTCTACCGCTTGTTCGGAAGGGAGAAGCCTGTTCATAAGGTTCTCGGCGGTGGAAAGCCGGCGGATATATTCATGTGGAAGGATAA
GAAGATGTCAGGTGTGCTTGGTGGTGCTACAGCCGCGTGGGTTCTGTTTGAGTTGATGGAGTACCATCTTCTCACTTTGCTTTGCC
ACGTGATGATTGTTGTGCTTGCTGTGTTGTTTCTTTGGTCTAATGCCACCGTGTTCATCAACAAGTCGCCGCCAAAGATACCTGAA
GTTCATATCCCTGAGGAGCCTATCCTTCAGCTCGCATCTGGGCTCTCTTCGTGAGATTGCTTCTGGCAGGGATCTCAAGAAATTCC
TCTGTGCTATAGCCGGCTTGTGGGTTCTATCCATCATGGGCGGCTGGTTCAATTTCTTGACATTGGCATACATAGCTCTTGTGCTG
CTCTTCACGGTTCCTCTTGTTTACGACAAGTACGAAGACAAGGTCGACCCATTAGGTGAGAAAGCAATGATCGAGATCAAGAAGCA
GTATGCAGTGTTGGACGAGAAGGTGTTGAGCAAGATCCCCATGGGCCCGTTGAAGAACAAGAAGAAAGATTAGGGTTTACAAAATG
GTGATCGTGTTCGTCAGATAGCAAGAAAAAAGGGTGTTGTGAAATGGTGTTGAAGCTTTATGTTAGATCGTTTAATATGTTATGTG
AATGAACGTGGATTTTCCTCGTTTTGTTTGTTTTTTCGTTTATGCCATTGTTGGTGAACGTGGAAGGGATACAATTAGTGTTGGGT
TCTTTTTCTCTCTAAACCTACTATATAACCATTTGAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194094 reticulon-like protein B1 [Arabidopsis thaliana]8077e-084
BAJ33905 unnamed protein product [Thellungiella halophila]7961e-082
ACC91263 reticulon family protein [Capsella rubella]7915e-082
XP_002869770 VIRB2-interacting protein 1 [Arabidopsis lyrata subsp. lyrata]7862e-081
BAH20230 AT4G23630 [Arabidopsis thaliana]4511e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9SUR3 Reticulon-like protein B18073e-085
Q9SUT9 Reticulon-like protein B27052e-073
Q9FFS0 Reticulon-like protein B45162e-051
O82352 Reticulon-like protein B54992e-049
Q9SH59 Reticulon-like protein B34793e-047

TrEMBL top hits (Blast detail)Scoree value
B2WS91 Reticulon family protein7914e-082
B9DHL3 AT4G23630 protein (Fragment)4519e-043
B9DHX9 AT4G11220 protein (Fragment)4025e-037
B9GX32 Predicted protein3837e-035
C6TKL2 Putative uncharacterized protein3774e-034

Arabidopsis top hits (Blast detail)Scoree value
AT4G23630.1 BTI1 (VIRB2-INTERACTING PROTEIN 1)8073e-086
AT4G11220.1 BTI2 (VIRB2-INTERACTING PROTEIN 2)7052e-074
AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3)5162e-052
AT2G46170.1 reticulon family protein (RTNLB5)4991e-050
AT2G46170.2 reticulon family protein (RTNLB5)4991e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
111  33%

Unigene MembersMember information