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Information for unigene UN18099
| FASTA Sequence |
| Unigene ID: UN18099 | Length: 1709 |
| SNP | GGAATCAAACTTCACATCTTCTTCTTCACTTTACCAGATCATATCGGAGCTTTAGGGTTTTTAAAACATCTGTAAAATTTGTATTG
TCTTCTTCTTCCTGATACTTTCGAATAGCATCTCTGATTTTAAAAAGTTTCTTTCTAGGAAAAGTTGGATCAATGAATCAGAATAG
TATAAAAGAATTAACAGTGGATTCATTACCAGTGGGACTGAGATTCCGTCCAACGGACGAGGAGCTAGTCAGTTACTATCTCCGCA
GGAAAATCAAAGGTCACGGTGATGACGTCAAAGCCATTCGAGAGATCGATATCTGCAAATGCGAACCTTGGGATCTACCTGATTTT
TCAGCGATCAAAACAAAAGACTCAGAGTGGCTCTTCTTCTGTCCATTGGACCGGAAGCACCCTAACGGAAGTAGACAGAACCGGTC
AACGATCGCAGGCCACTGGAAGGCCACAGGAAAAGACCGGAAGATTAAATCAGGCAAGAACAAGGTCATCGGCGTGAAGAGAACTC
TTGTTTTCCACTCTGGTCGTGTTCCTAAGGGAACGCGAACGAACTGGGTTATGCACGAGTATCGCGCCACCGAGCATGACCTCTGT
GGCACCAACCCTGGCCAGAGTCCGTTTGTTATATGCAAATTGTTCAAGAAACAATACCCGAGTTTAGTGGAAGAAGAAGAAGCTGT
CTCCTCTCCAACATCTTCCCTAGATAAGACTAAATCCGAAGTATCAATGGTCGCTGTGAAGCCTGAGTCTTCTCTTGTAATCTCCG
GTGATTCTCGTAATGGTGGTGCTTGCAACGAGGCTACTACCTCCAAGCTTGGAGATCTTGATTGGCTGTCTTTTCCAGAGCTGGAG
TCCATGACAGTGTTCTCTCCTTTACACTCTCAAGTCCAATCCGAGCTTGGATCCTTTCTTCAGCCTAGCTCTAGTGACTTCTCCGG
GAACCATAACAACAACAACTTCCAGATTCAGACTCAGTACGGTACAAACGACGAAGAAGATACAGATGTATCCCGCTTCCTCAATT
CGGTTCTTGATTTCCAAGACGATCAAGACTTTGTTTTTCCGTGTGAGTTCGACGGTGAAGTGCCAGATCAGATTGCACCAGCGTAT
CAGCAACAGCGCTCGGCAGGTGACATGAGCGATGATGTTTCAAGAACAGGTATCAAGTTACAGCCTCGGCGTGAACAACCTGAGGG
TGTTACCACTGACTATGTAATCCATGGGAACGCCTCAAGAAGGTTGCGTCTGCAAACTATCAAGAGAGAGGTTGAGGATACGGACG
GGGAAGCTATAAAGAAGGGGAAGCTGATGAGATCAAAGAGCAGAACAAGATTCTTGTTTAAGAAGATTATGCCCGTGAGATGTTCA
TACGGAGGACTTCTTAGGGCGGCCGTTGTTGCGGTTCTGTTCTTGATATCAGTTTGCAGTCTAACCACAGACTTCAGAGCTTCACT
GATGATCTGAAAACCGTAGAACCTTGTTGTGTATATTTGTTGTTGGTTTTCAGTTTTCATCTTATCCGGGGCCAGTTTATGAGGGT
AACTTGTTGCGTACTGTATAATGTGGCTACTTCTTGACTTTGTATCGGTAGTGTTCTTATATAGATAAGGTTTTTGTTTTTGAACA
CGTCTTTTTTATTGTGAGTTATTATGACATTATCTGTGGAATCTCACATATACTTCAAACTTTTATTATATAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877683 ANAC062 [Arabidopsis lyrata subsp. lyrata] | 1232 | 7e-133 |
| NP_190522 NAC domain-containing protein 62 [Arabidopsis thaliana] | 1197 | 8e-129 |
| NP_197847 TCV-interacting protein [Arabidopsis thaliana] | 779 | 2e-080 |
| XP_002874210 tip [Arabidopsis lyrata subsp. lyrata] | 692 | 3e-070 |
| XP_002317831 NAC domain protein, IPR003441 [Populus trichocarpa] | 662 | 9e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84K00 NAC domain-containing protein 78 | 458 | 2e-044 |
| Q7GCL7 NAC domain-containing protein 74 | 420 | 4e-040 |
| Q9SV87 Protein BEARSKIN1 | 412 | 4e-039 |
| O49255 NAC domain-containing protein 29 | 410 | 6e-039 |
| Q93VY3 NAC domain-containing protein 72 | 398 | 2e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SCK6 NAC2-like protein | 1197 | 6e-129 |
| Q9LKG8 At5g24590 | 779 | 2e-080 |
| B9I282 NAC domain protein, IPR003441 (Fragment) | 662 | 6e-067 |
| B9IDH0 NAC domain protein, IPR003441 | 661 | 8e-067 |
| B9S5P3 Transcription factor, putative | 643 | 1e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G49530.1 anac062 (Arabidopsis NAC domain containing protein 62); transcription factor | 1197 | 3e-131 |
| AT5G24590.2 TIP (TCV-INTERACTING PROTEIN); transcription coactivator/ transcription factor | 779 | 9e-083 |
| AT4G35580.1 NTL9 (NAC transcription factor-like 9); transcription factor | 610 | 3e-063 |
| AT4G35580.2 NTL9 (NAC transcription factor-like 9); transcription factor | 610 | 3e-063 |
| AT1G33060.1 no apical meristem (NAM) family protein | 573 | 7e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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