Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18103

FASTA Sequence
Unigene ID: UN18103Length: 1226 SSR 
GGATTAAAAAGACGTTCACGTTTCTTCCTCCTCACACCAGCATAAGAAGAAAGAAGAACAATTGAAGAAAGCAGGCAGGAACATAG
ATTCTTTCTTGTCCTTTCAGTGAGGGTTTTTGGTTTTAAGAATCGATTGATTGATTGATTGAGAAGGATGTCGAGTTCTGCCGAGT
GTTGGGAATTGTCGGGTGAGAGGAAGAGGGTGCTTGAGAAGAAGCCGAGCTTCTCGCAAACATGTAGTCGATTGAGTCGTTATCTC
AAGGAGAAGGGTAGCTTCGGAGATCTCAGCTTAGGGTTGACATGCAACCCCGACCTTAATGGGGGTTTTGGTGTGTCACGTGAGCC
CACGATGATGAATCTCTTCCCTTCTACGGCTGCTCAAGACGTTAAACCGAAGAGTGATGTGATTCCTCGCCAATCAAGCTTTTCTT
CTTCCTCGTCCCCTGGTGGAGTCAAGGAAGAAGTCGATAAGATCATGGATACTAAATCTGTGAAGGTGGAGTCTCAATCTGCGCCA
TTGACCATATTCTACGGCGGTCAAGTTATGGTGTTTGATGATTTTCCTGCTGAGAAAGCCAAGCAAGTCATTGACTTGGCTCACAA
AGCAAGTGCTAAAAGCTTCACATCTGAACTGAACAGTAGCCAGAGTGCTTATACTCAAAACATAGCCAAGAATCATAAAGAGATTG
CTTCCACTACCCCAAATCCAGCTTCTAGTCCTGTGAAACCGCTGCACCAGAGCCAATCCAAGCCAACAAGTCCTCTTTAGCTTGCG
GTAACGAACTCCCAATTGCTAGAAGAGCTTCACTTCATCGATTCCTTGAGAAGAGAAAGGATAGGATTTCATCAAAGGCACCGTAC
CAGATAGACGGTTCTACCGAAGCATCTTCCAAGCCTAACACATCTTGGCTCGGTTCCCAGTAATCTCCTTGAGTTGAGACTCCTCC
TTTTGACGATGCTCCCATCGTTTACTATAATTAATACTATCAAGAAGCTCTACTGATTCCACTCCTAGGAGTTTTGTTGTCTGTTC
AATGCGCCAGAAAAAAAAACTCAGTATATCTGTACGAAACTAATCCTTATAGTTTTGCTACTTTTTTTGGGTTTAAAGCCATTGAT
TGTGTTATATTAGACCTTTTCATCTGCTGTTCTCAGCATTTGCTTGCAACTTTTGTAAGAAACATCAGTTTCTTATTTATTTATTT
TTGGTTGTTGTTGTTGTTGACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889001 hypothetical protein ARALYDRAFT_476633 [Arabidopsis lyrata subsp. lyrata]6618e-067
BAJ33919 unnamed protein product [Thellungiella halophila]6582e-066
NP_565096 protein TIFY 10B [Arabidopsis thaliana]5731e-056
AAM64554 unknown [Arabidopsis thaliana]5722e-056
NP_564075 protein TIFY 10A [Arabidopsis thaliana]4637e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q9S7M2 Protein TIFY 10B5735e-058
Q9LMA8 Protein TIFY 10A4633e-045
Q9C9E3 Protein TIFY 11B2115e-016

TrEMBL top hits (Blast detail)Scoree value
C6T4J6 Putative uncharacterized protein3093e-026
C6TEN6 Putative uncharacterized protein2961e-024
A9PIL0 Putative uncharacterized protein2951e-024
C6TAX9 Putative uncharacterized protein2905e-024
C6TD57 Putative uncharacterized protein2897e-024

Arabidopsis top hits (Blast detail)Scoree value
AT1G74950.1 TIFY10B5735e-059
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding4633e-046
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding2392e-020
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)2114e-017
AT5G20900.1 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)1192e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  71%
 
121  14%
 
181  14%

Unigene MembersMember information