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Information for unigene UN18104
| FASTA Sequence |
| Unigene ID: UN18104 | Length: 1115 |
| SNP | TTTTTTCCGCCAATATTTTCCGATCGCAGCGGAGCTTAAACAGTGGAAACCATGCTACTTTCGACGGTTTCTAGCTCCGCGCCCAT
CTTCCGCATCGGTGAACCACCAGCGTCCGTAATTGGTTGGAAGCAAGCGTTGAGATTTCGGAGGACGACGAAGCCTAGGGCTATCA
TCTCTTGCGATTATTCATGCATCGAGGTTAGGGATATATGCTACCGTCCTCCTGGAACAGAGTTGAATATTTTGAATGGTGTTAAT
CTTTCTCTCCGTGAGAAGAGCTTTGGATTGATTTTTGGCAAGAGTGGGAGCGGCAAAACTACGCTTTTGCAGCTTCTTGCTGGGCT
GAACAAACCTACGTCAGGTTCCATTTGTATCCAAAGATATGGGGATGATGGCCAGCTAAAGGCGGATCCTGAGTTGTTGCCCACTG
AGAAAGTGGGCATTGTTTTCCAGTTTCCAGAGAGATTCTTTGTTGCAGATAATGTGCTTGACGAGATTACTTTTGGTTGGCCAAGG
CAAAAGGGTAGTTTGCAGTTAAGGGAGCATCTGACTTCAAACCTCCAGAGGGCATTTAATTGGGTTGGGTTAGACAGCATCCCACT
TGATAAAGACCCCCAGTTACTAAGTGGAGGCTATAAGCGTCGGCTTGCACTAGCTATTCAACTGGTGCAAACTCCTGATTTATTGA
TTCTGGATGAGCCCCTCGCTGGTCTTGATTGGAAAGCACGCGCAGATGTTGCGAAGCTCTTGAAGCACCTAAAGAAGGAACTGACT
TTACTTGTTGTAAGTCATGACTTAAGAGAGTTAGCAACCTTGGTCGACCAGTCATGGAGAATGGAATCAGGTGGTGTTCTTGTTGC
AGAGCGTCCACCAGTTTAGTTCGATATTTATTAACTGCCGAAGGTCCCTACCAGCTCCAACACCAAGTCTGCAAAGCAATTTTGGA
TTATTATCTGGTTCAATCACAAGCAGAAAACTAGTGCATGCCTAAATGCCAATGTATCAAAAAAAATTGTCTTTTCGAGTAAAGAT
CCTACATACTTTTTTGAAAATACAGAATCACATTCTTTCTTTGAAATAAATGGGCTTATGTAAATATTATAAATTAGTTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196914 ABC transporter I family member 11 [Arabidopsis thaliana] | 1284 | 4e-139 |
| XP_002873647 non-intrinsic abc protein 14 [Arabidopsis lyrata subsp. lyrata] | 1252 | 2e-135 |
| XP_002274500 PREDICTED: hypothetical protein [Vitis vinifera] | 949 | 3e-100 |
| XP_002328881 predicted protein [Populus trichocarpa] | 905 | 3e-095 |
| XP_002512910 metal abc transporter, putative [Ricinus communis] | 887 | 4e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LEF6 ABC transporter I family member 11, chloroplastic | 1284 | 2e-140 |
| A0PXX8 Cobalt import ATP-binding protein CbiO 2 | 320 | 1e-028 |
| A3DJK5 Cobalt import ATP-binding protein CbiO 2 | 319 | 1e-028 |
| Q04FM1 Cobalt import ATP-binding protein CbiO 1 | 310 | 1e-027 |
| Q839D4 Cobalt import ATP-binding protein CbiO 2 | 296 | 6e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N0Y9 Predicted protein | 905 | 2e-095 |
| B9RH51 Metal abc transporter, putative | 887 | 3e-093 |
| C4J260 Putative uncharacterized protein | 856 | 1e-089 |
| B9GAR4 Putative uncharacterized protein | 822 | 1e-085 |
| Q2R434 ABC transporter family protein, expressed | 822 | 1e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G14100.1 ATNAP14; transporter | 1285 | 1e-141 |
| AT5G03910.1 ATATH12; ATPase, coupled to transmembrane movement of substances / transporter | 198 | 1e-015 |
| AT4G25450.1 ATNAP8; ATPase, coupled to transmembrane movement of substances / transporter | 192 | 6e-015 |
| AT4G25450.3 ATNAP8; ATPase, coupled to transmembrane movement of substances / transporter | 192 | 6e-015 |
| AT5G61740.1 ATATH14; ATPase, coupled to transmembrane movement of substances / transporter | 169 | 3e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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