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Information for unigene UN18128

FASTA Sequence
Unigene ID: UN18128Length: 611  SNP
GGGCGTTCACCCCGAAAGGCCTATCTACCTATTAACCCGGCGAGATCTGCAACTCTTCCCGGCGGTCGAGAAAAAATGGTAGCGGC
AAAGAAGACGAAGAAGTCCCATGAAGGAATCAACAGCAGATTAGCTCTGGTCATGAAGAGTGGAAAGTACACTCTCGGCTACAAAT
CTGTTCTCAAATCCCTTCGCAGCTCCAAAGGTAAGTTGATTCTGATCTCGAGCAACTGCCCTCCGTTGAGGAGATCAGAGATCGAG
TACTACGCTATGCTTGCTAAAGTCGGTGTTCATCATTACAATGGCAACAATGTCGATTTGGGTACTGCTTGTGGAAAGTACTTCCG
TGTCTCTTGCCTCAGCATCGTTGATCCTGGTGATTCCGACATCATCAAGTCACTTCCTGGCGACCAGTGATTTTTGGTTTTGTTCG
GTTGTTACGGTCTTAGCCATGTTTTGTTTGATTTTATGCAATGTGTTCTTGGAAAAGACAGAATGTGTTTGGTTTCTTTCTTAAAC
TCCTTAATTACAGTTTCGTCTCTACTGATGGAACCAGTTGCATGAAATGAAACTTTAGGTTAACTTTTTTTCCCAATTGCTATAGA
CTTGTTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883147 60S ribosomal protein L30 [Arabidopsis lyrata subsp. lyrata]5724e-057
NP_174853 large subunit ribosomal protein L30e [Arabidopsis thaliana]5672e-056
XP_002889167 60S ribosomal protein L30 [Arabidopsis lyrata subsp. lyrata]5626e-056
NP_565164 60S ribosomal protein L30-2 [Arabidopsis thaliana]5572e-055
NP_188504 60S ribosomal protein L30-3 [Arabidopsis thaliana]5545e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8F7 Putative 60S ribosomal protein L30-15678e-058
Q8VZ19 60S ribosomal protein L30-25571e-056
Q9LSA3 60S ribosomal protein L30-35543e-056
O49884 60S ribosomal protein L305382e-054
Q9M5M6 60S ribosomal protein L305202e-052

TrEMBL top hits (Blast detail)Scoree value
Q0WSA0 Similar to ribosomal protein L305572e-055
A7X6P5 Ribosomal protein L30e5392e-053
A9PBT5 Predicted protein5356e-053
B9SSM2 60S ribosomal protein L30, putative5302e-052
A9PC11 Predicted protein5293e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G36240.1 60S ribosomal protein L30 (RPL30A)5686e-059
AT1G77940.1 60S ribosomal protein L30 (RPL30B)5589e-058
AT3G18740.1 60S ribosomal protein L30 (RPL30C)5552e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  45%
 
113  27%
 
122  18%
 
101  9%

Unigene MembersMember information