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Information for unigene UN18134
| FASTA Sequence |
| Unigene ID: UN18134 | Length: 1097 |
SSR | SNP | GGAGGAAGTAGGAGAAGTCTATCTTCTCTCCGTCGTTCCCAACACCAATCGCATAATCAATCAATTGAACTTCAACAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGCGAAACCCTAATTTCTCTGATCGTAAAAAAGAGAGAAAACTAACTTTACTCAATTCCCTTTTTT
TTGCGATTAGCTAACATGGCGTTCGGAAACTGTCGGTGGGAGCTCCTCGCGGCTTCTCTAGCCCTGACTTTAGCTCTGATTCACCA
CCTGGTGGATGCGAACTCGGAAGGAGATGCTCTTTACGCGCTTCGCAGGAGCTTATCGGATCCAGACCACGTGCTCCAGAGCTGGG
ATCCAACTCTTGTTAACCCTTGTACCTGGTTCCATGTCACCTGTAACCAAGACAGCCGCGTCACTCGTGTGGATTTGGGTAATTCA
AACCTTTCAGGACATCTTGCACCTGAGCTTGGGAAGCTCGAGCATTTACAGTATTTGGAGCTGTACAAAAACAAAATAGAAGGGAC
TATACCTTCTGAACTTGAAAATCTGAAGAACCTCATCAGCTTGGATCTGTACAACAACAATCTTACTGGGAAAATCCCTTCTTCTT
TGGGAAAATTGAAGTCTCTGGTCTTTCTACGACTCAACGACAACCAATTGACTGGTCCAATCCCTAAAGAACTCACGAAAATCCCA
AGCCTTAAAGTCGTTGATGTATCGAACAATGATTTGTGTGGAACTATCCCAACAGAAGGACCTTTCGGACACATTCCTTTGCAGAA
CTTTGAGAACAACTCGAGATTGGAGGGGCCGGAACTAATCGGTCTTGCAAGCTACGACACCAACTGCAACTGAAACAACTGGCCAA
ACGACCTGAAAAAAAACAAGAAATGAGGGGGTGAGACCTTAGAAGAACACTTCACCACTTTATCAAAATATCACATCTATTATGTA
ACAAGTATATATATGTATGTTCGTTGTGTGACACACTGAGATGTAACATTTGTTGTATTGGTAGCAAGTTCTTTACCTTTGTCTGC
ATTAACATTTGTGTGTATGATCTGTCATATTAATACGAAAACTATGGATTTGTGTGCTTTATTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197608 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 1011 | 2e-107 |
| NP_189960 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 952 | 1e-100 |
| BAD44554 unnamed protein product [Arabidopsis thaliana] | 938 | 5e-099 |
| ACM89589 leucine-rich repeat protein [Glycine max] | 910 | 9e-096 |
| ACU22741 unknown [Glycine max] | 905 | 3e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XIC7 Somatic embryogenesis receptor kinase 2 | 593 | 2e-060 |
| Q94AG2 Somatic embryogenesis receptor kinase 1 | 588 | 8e-060 |
| Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | 567 | 2e-057 |
| Q9SKG5 Somatic embryogenesis receptor kinase 4 | 529 | 6e-053 |
| Q8LPS5 Somatic embryogenesis receptor kinase 5 | 492 | 1e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FPJ5 AT5G21090 protein | 1011 | 1e-107 |
| Q6NQP4 At3g43740 | 952 | 8e-101 |
| Q67XM7 MRNA, complete cds, clone: RAFL25-33-L05 | 938 | 3e-099 |
| C6ZRZ5 Leucine-rich repeat protein | 910 | 6e-096 |
| C6TIK1 Putative uncharacterized protein | 905 | 2e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G21090.1 leucine-rich repeat protein, putative | 1012 | 5e-110 |
| AT3G43740.1 leucine-rich repeat family protein | 953 | 3e-103 |
| AT1G34210.1 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase | 593 | 2e-061 |
| AT1G71830.1 SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase | 588 | 7e-061 |
| AT4G33430.1 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase | 567 | 2e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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