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Information for unigene UN18139

FASTA Sequence
Unigene ID: UN18139Length: 1752 SSR 
GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCTGTATATATAAATTTAAAATACTAAAAAGAAGGAAAAAAAAGACAGAGTGT
GAAATTGCGAGAGATAATGACGAAATATGGTGAGCAGAGAGATTCTCCGGCTATAGCAGCTTCGACGGTCACCGCCGCAAAACGAT
TTTTGACTCCTGGAAGATTCGTGACGATCTTGTGTATAGTGAACCTGATAAATTACGTGGATCGAGGAGTGATTGCGAGTAATGGT
GTTAACGGAAGCTCGAGGACTTGTGATTCCAAAGGCCTTTGCTCTGCTGGCACTGGCATTCAAGGAGAGTTTGGGTTAAGCAACTT
TCAAGATGGTCTTTTGTCTTGCCTTTATGGTTGGTCTTCTTGTTGCTTCTCCCATCTTCGCTGCTCTCTCCAAAAGGTTCACTCCT
TTTAAACTGATTGGTGTTGGACTAACTGTTTGGACTCTCGCTGCTGTTGGTTGCGGCTTCTCTTACAACTTTTGGATGATTGCTGT
TTTCCGAATGTTTGTTGGGGTTGGTGAAGCTTCCTTCATTAGTCTTGCAGCACCTTACATCGATGATAGCGCTCCTGCTGCAAGGA
AAAATCTGTGGCTTGGACTGTTCTACATGTGTATACCAGCAGGAGTTGCTCTTGGCTACGTGTTTGGTGGATATGTTGGAAACCAT
CTTGGATGGCGTTGGGCGTTTTACATTGAGGCAATCGCAATGGCTTTCTTTGTTGTTTTGTCCTTCTGTATCAAACCTCCACAGCT
CAAAGGTTTTGCTGCTAAAGAATCGAAGAAACCCTCTCCGTCTATTGAAACGGTGGCTCTCACACATGCGGAAGCTAAAGCCGTAA
CCCCCAAACCAAAGACTCAGAACCTGGTAGTCGTATTTGGAAAAGACATGAAGGCTCTTTTCAGCGAGAAAGTATTTATAGTGAAC
GTTCTTGGCTACATCACCTACAACTTTGTGATCGGAGCTTACTCATATTGGGGACCAAAAGCTGGTTTTGGTATCTACCATATGAA
AAACGCAGACATGGTTTTTGGAGGCCTTACTATCATCTGTGGTATCATTGGAACTTTAGGCGGAAGCTACGTACTTGATCGCATCA
ACGCTACACTTCCAAACACCTTCAAGTTACTAGCGGCATCAACTTTATTCGGCGCAGCGTTTTGTTTCGTTGCTTTCTGCATGAAG
AATATGTATGCATTCATCGGTCTGTTCGCAGTGGGAGAGATTTTAATCTTTGCTCCACAGGCCCCGGTTAACTTTGTGTGTCTACA
TTGCGTTAGACCAAACTTGAGACCACTATCAATGGCTTCTTCAACTGTTTTGATCCATATCTTAGGAGATGTTCCTTCTTCTCCTC
TGTATGGAAAAATGCAGGATCGTCTCAAAAACTGGAGGACATCAACTCTTATTATTACTTCAATCCTCTTCCTCGCAGCTATTATA
TGGGGCATTGGGATATTTATGAATAGTGTGGACCGTTCTAATGAAAAGAGTGAAGATGAGGTCGAGGAGGAAGAGAAATTGGAAAC
CAAAGCAGACAACAACAACAACAACTCTGTTCCCGTCTAAAATTTTGAGGACATTTATCAATTTTTCTTCAACCACAAAATAAAAA
TTCTTTCGCATTTGTTCAGTTGAACTACAATTCATTTGATTCATTTTCTGTCTCCTTGCTTCTTAATTTCTTTGGTGTACATAAAC
TAATTTTTTAATAATAAAATTTTGCTTTGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866685 hypothetical protein ARALYDRAFT_358769 [Arabidopsis lyrata subsp. lyrata]18601e-205
NP_680469 major facilitator protein [Arabidopsis thaliana]18591e-205
CAA16689 predicted protein [Arabidopsis thaliana]17758e-196
XP_002313948 sugar transporter/spinster transmembrane protein [Populus trichocarpa]13545e-147
XP_002300304 sugar transporter/spinster transmembrane protein [Populus trichocarpa]13062e-141

Swiss-Prot top hits (Blast detail)Scoree value
Q08DX7 Protein spinster homolog 12001e-014
A2CER7 Protein spinster homolog 32001e-014
Q8R0G7 Protein spinster homolog 11982e-014
Q2YDU8 Protein spinster homolog 11982e-014
Q9H2V7 Protein spinster homolog 11973e-014

TrEMBL top hits (Blast detail)Scoree value
Q6NMN6 At5g6568718591e-205
O49546 Predicted protein17756e-196
B9HN62 Sugar transporter/spinster transmembrane protein (Fragment)13544e-147
B9GIR1 Sugar transporter/spinster transmembrane protein (Fragment)13061e-141
Q9ZQ41 Putative uncharacterized protein At2g2273013033e-141

Arabidopsis top hits (Blast detail)Scoree value
AT5G65687.1 transporter-related18595e-208
AT2G22730.1 transporter-related12637e-139
AT5G64500.1 membrane protein-related7672e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  80%
 
71  20%

Unigene MembersMember information