Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18145

FASTA Sequence
Unigene ID: UN18145Length: 1023 SSR 
GAAACATAACATATAGTAATATTTATATAAAAAAGTAAGTGACGGCTAACGATACTTACATTTGTATTATTTTACAACTGGATAGA
TCACACAAAGAACAAGTCCACCTTCCAAAGTGCAAAGTTTAGAGAATATAGGTACAATACAAAGCCAAAAGCATAACTAATAAGCG
AGCAAGCTCACACACACACACACACAACACACACACGTCTGATCTGATCAGCTGCTGCCTGCGGCACGGTCTTCTCGGTTAACATC
ATCGAGAATGACGACGAGAGAGGCAATGAAGGCATAGTCCACGTTTGGATAAACAGTCACCGAGAAATTGTCTTTTCCCAAGAACA
CGCTCTGCACCGTGTGCTTCTTGTGCATTTGGGCAACGATGGCGTCAGATTCGCCGGCATAGACGACACAAGAGCGCTCGAACCAG
CTCCCTTTGACCCTAAAATCACATCTCTTCTCATCCTTATTGTGACTCAAAAACACATCGAGTTTGGTCTTAAACTGAAGCATCGA
CGATCTCTTAACCGTGTACAGCAGATCACGCTGCTCCGTACTCCCTCCTCTAAATACTTGCCACCTGTCGTGCAAGCTCACCATCT
TCTCTCTCAAAGTCAAGACAGGAGATCCAGAACCATCCAATAAAACCCTCTTGTCATGAAGACCAAACACTGGCTCCTTCACCTTG
AACAGCAAGTTCCCGTTAACGTCCGTTATAACGAAGTTACCATCAGTCAACGTCATCATCTTCCGCACGATCGCCAGATCCACGGG
ATACGGAGTACAGAACCTTGGATCCACAATCACTCCGGCGATGCCACCGCCTTGTGGAGGCTGTGGAGCCGTGCCTGGTGGGTAAG
CATACACATAAGACTGCTCCATTTTCTTCTTTCTTCTCCAGCTCAGCTGGAGGGTTGAGGAGGTCGATGTCATTTTGGAGAACCAT
GATTGCTTCCGGAAATGCGAGGAAGACGACTTGGTGAAAACCCTAAACGGAGGATGCAGCTTTGTTGTTCACTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872996 hypothetical protein ARALYDRAFT_486891 [Arabidopsis lyrata subsp. lyrata]10147e-108
NP_850751 LURP-one-related 15 protein [Arabidopsis thaliana]10057e-107
1ZXU Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g017509644e-102
AAM62599 unknown [Arabidopsis thaliana]7782e-080
NP_568095 LURP-one-related 15 protein [Arabidopsis thaliana]7728e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9LZX1 UPF0706 protein At5g0175010053e-108

TrEMBL top hits (Blast detail)Scoree value
Q9LQ36 F14M2.3 protein7279e-075
C6TBB0 Putative uncharacterized protein7206e-074
C6T3J7 Putative uncharacterized protein6741e-068
C6T393 Putative uncharacterized protein6722e-068
Q8VYP1 Putative uncharacterized protein At2g145606516e-066

Arabidopsis top hits (Blast detail)Scoree value
AT5G01750.2 unknown protein10053e-109
AT5G01750.1 unknown protein7723e-082
AT3G11740.1 unknown protein7643e-081
AT1G33840.1 unknown protein6658e-070
AT2G14560.1 LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)6442e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  100%

Unigene MembersMember information