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Information for unigene UN18153
| FASTA Sequence |
| Unigene ID: UN18153 | Length: 1345 |
SSR | | GGAGCACGACAACGAAGCAAAAAAGAAAGTAGTTTTTGTTCCCGTTGAAGTTTTCTCGATCTAGCTTATCGGCATTGCAGTTGATA
ATACTTTACTCCATAGTTGTAAAGCTATGGTGACGATCCGGAGCGCTTCAGTCTTTATTCTGGTTCTGCTCGCTGTCTCATGCCTT
GCTTTGGTTGCAAATGGGGAAGACAAAACGATTAAAGTGAAGAAGGTGAGGGGGAAGAAAGTGTGCACGCAGGGATGGGAATGCGT
CTGGTGGTCTCAGTACTGCTGTAGCGAGACCATCTCTGATTACTTCCAGGTGTATCAGTTCGAGCTCTTCGCCAAAAGAAACACCC
CCATTGCTCATGCTGTTGGTTTCTGGGACTACCAGTCTTTCATCACCGCCGCTGCTCTCTACGAGCCTCTTGGGTTCGGTACCACT
GGTGGAAAGCTCATGGGACAGAAAGAAATGGCTGCTTTCCTCGGCCATGTCGCCAGCAAAACGTCCTGTGGCTATGGAGTTGCAAC
AGGAGGGCCTTTAGCTTGGGGTCTGTGCTACAACAGGGAGATGAGCCCAATGCAATCTTACTGTGACGAGACCTGGAAGTATAAGT
ACCCTTGCAGCCCTGGAGCTGAATACTACGGACGTGGTGCTTTACCCATTTACTGGAACTTCAACTACGGTGCAGCAGGGGAAGCA
CTAAAAGCTGATCTCTTGAACCACCCTGAGTACATCGAGCAGAACGCCACGCTTGCCTTCCAAGCTGCAATCTGGAGATGGATGAC
ACCGATCAAGAAAGCTCAGCCTTCAGCTCACGACATCTTCGTTGGAAACTGGAAACCGACGAAGAACGATACTCTGTCCAAACGTG
GACCGACTTTTGGTACCACCATGAACGTCTTGTACGGAGAGTACACGTGCGGTCAAGGTGACATTTAGCCGATGAACAACATTGTC
TCTCACTACTTGTACTTCCTTGATCTTTTGGGTATTGGAAGAGAAGACGCAGGGCCTAACGAGGAGCTCAGCTGCGCCGAGCAGAA
ACCGTTTAACCCTTCGACTGCACCTTCCTCCTCCTCCTCGTAAGTCTCTCTCCGCATTGCTCATTGTTCTCAAGTCTCTTTTGCTT
TTAACTCGACAAGTGTTATGTAATAAGTGAAATTGCTTGTGTGTGTGTGGCTTCTTTTTGTCTAGGGCTTGGTCCCTGTAGAACAA
CTTATATTTTCCTGTATGTAATACCTTATTCAATTATTATTATGTTTTGCCGAATGTTTGTAAAAATAGAGAAGCAAGGAGAGACA
TTAATGTGGGCTGTGAATGATGTTTCAGTTCGTTTATAAAATAAGTTTGGTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89660 chitinase [Brassica rapa] | 1686 | 1e-185 |
| NP_172076 chitinase-like protein 1 [Arabidopsis thaliana] | 1649 | 2e-181 |
| XP_002892310 pom-pom1 [Arabidopsis lyrata subsp. lyrata] | 1648 | 3e-181 |
| BAH30273 hypothetical protein [Arabidopsis thaliana] | 1643 | 1e-180 |
| BAJ33659 unnamed protein product [Thellungiella halophila] | 1543 | 5e-169 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MA41 Chitinase-like protein 1 | 1649 | 1e-182 |
| Q9LSP9 Chitinase-like protein 2 | 1192 | 1e-129 |
| P06215 Endochitinase | 473 | 2e-046 |
| P36361 Endochitinase CH5B | 472 | 3e-046 |
| Q39799 Endochitinase 1 | 470 | 5e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXW1 Chitinase | 1686 | 8e-186 |
| A8IXW2 Chitinase | 1321 | 2e-143 |
| B9RPJ5 Chitinase, putative | 1321 | 2e-143 |
| Q7X7Q1 Class VII chitinase | 1314 | 1e-142 |
| A5B1C7 Putative uncharacterized protein | 1291 | 5e-140 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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