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Information for unigene UN18155

FASTA Sequence
Unigene ID: UN18155Length: 1031 SSR 
GGTCACAAGAATAATGATCACAACTATCTCTATCTATCTTTAATACATCTGCAGGCTAGAAAGGTTATTATAACAAAATACCAAGA
AAAAAAAGAAGAAGAAGAAGAGAACTAAAGTTAAAAAAATAAAAACACAACAAATAGTAGATTTTATTGTGACAAAAATGAAAAAA
GGGAAAAAAATCAGAGAATAATGGAGAGAAATGGTGGTGGTGCTAGCCATCGATCTGATCAAGAAGCATCTCCTGGTACTGCACTC
GCTGCTGCAAAACCCTTTTTCTCCTCTGTAAATGTAGATGTCATGTTTTTGGTCAAGATTCTTGTTGCAAGTGTAGCAATAACTAA
AGAAATTATTCTTGGTCTCCGTGGGTACTTGTGGCAAAGAAACAGAGGAAGGAGGAGTCGCCTCCACGAAAACAGAGTTATCGAAG
ATATGGGTGATGGTTGGGTTTGGACCGTGAGATATGACGCGAGTGTAGTCCTCCGTCGTCTGGTCAACCTCGCTCACAGTTAAGAC
CTTTGTTTTGAGACAAGGGCTGAGCTGGCTGGTGCAAGCAGCAGCGGATTTAGTACCAAAATCAGGTGAAGGTATCTGGACTCTGA
GCTTTGACCCGAAAAGGACCATCATGTTGACAGGTTTGTTGGAGCGGTCTCTGTTTTTGACGAGATCGGCGAGGCCAAAGGCTTCA
GGTGGGTGAAGAAACCTTTGGGGTTTAGGGATTTTGGAGGAGGAGAAGAAAAGGAATGGGTGGTTGGCTTCGAGGGTGGAAGTAGG
GCTGATGATGGAGTCAACATGAGTGATCTTAGGAGAGAAAAACCTAAACTTTGGAGAGCTAAAGAAGACAGATGGGTAATAGGTGT
TAGGTGTTGGAGATGGAAGTTGATCAGCCATTAATTAGTTTAGAGATGCTTTGTTTCTCAGCAGAACATCACAGTTAAAAGACAGT
CAGATCAGATCATAACTCAGTAGCTTCCATGGAGAGAGAAAAAGAGAGACTGATCGAATTTTCAGACAAAGAGATGAATATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878503 mediator of aba-regulated dormancy 1 [Arabidopsis lyrata subsp. lyrata]6616e-067
AAK92226 senescence-associated protein SAG102 [Arabidopsis thaliana]5641e-055
CAB86422 putative protein [Arabidopsis thaliana]5641e-055
NP_567143 uncharacterized protein [Arabidopsis thaliana]5641e-055
AAM65522 unknown [Arabidopsis thaliana]5551e-054

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LGS1 Senescence-associated protein SAG1025647e-056
Q8VZ84 Putative uncharacterized protein F16M2.65647e-056
Q9M1W8 Putative uncharacterized protein F16M2_605647e-056
Q8LA86 Putative uncharacterized protein5558e-055
A9PI19 Putative uncharacterized protein2492e-019

Arabidopsis top hits (Blast detail)Scoree value
AT3G63210.1 MARD15644e-058
AT3G22550.1 senescence-associated protein-related2088e-017
AT5G11460.1 senescence-associated protein-related1201e-006
AT1G53885.1 senescence-associated protein-related1138e-006
AT1G53903.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: senescence-associated protein-related (TAIR:AT1G53885.1); Has 277 Blast hits to 277 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1138e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  43%
 
122  29%
 
81  14%
 
101  14%

Unigene MembersMember information