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Information for unigene UN18157

FASTA Sequence
Unigene ID: UN18157Length: 1278 SSR 
ACTGCTAATAAAATCTATTTTCTTCCGGTACTAAATACTCAAATTTTCGTTGTTAATCGAAAACCTTGTTCTATTCTCTAAACTCT
GTAGAAATGATATAATGTAATAACAAGAATCACAATAATTAACCGTAACCACCTCTCTCTCTCTCACACACACACACACAAAACTA
CCGAGTCTTGATCGTCTTTCATTCAAGATGAAGCCGCTTCTGCTTCTTTTTCTTCTGCGTTTCCTTGTGCTGTGGCTTCTTCTCCT
TCAGCTTCACTGGGCTTTTCTGGTCCAGGTCCAGCTGATACTTTCACCATTGAAGGACGTAGAAGCCTTTCCCCTAGCAAGAAACC
TTTCCTGTATTCTTCAAGTACTATACCTTCTTCATATTCTGCAGAATCCTCCCTCATTATTGCCTCATGAAGCATTGGATCAAACT
GCTTGCCAACTGTCTCCACAGTGACCACACCGAGCGACCCCAGAATCTCCACAAACTGTTTGTATATGCTCTGGTAGCTGTTAGTG
ACTTTCTCCTCTCCCTCAGTCTCCACTTTAATCTGAGACTTAGCTCTCTCGAAATTATCCAAAACCGCCAAAAGATTCTCCACAAC
CTCTCCCTGAGCATTGGAAACAAGGTTCAGCCTTTCCCTCTCCGTCCTCTTCCTGAAGTTGTCGAAATCCGCACTGATTCTTATCA
GCCGATCCCTCTCCACAGTTAGCTCATTGGTTAAAGATGCTACTTTATCCTCGAGGTGAAACTTTTCGTCTTCGATGGACTTCAAT
GATGCTTCTATCTCAGCAATCTTCTCCTCGTTGCTCTCTGCTAAAGCTTCTTTATACGAATTCAGTAATGCCACGGTAACCGCCGC
TTCTTCCTCAGAGCTAGTAGCTTCACTCTCAACACCAACAGCACCATCAGTATCCTGGACTTGGGGTTCGTTGGATTCGACCTCAG
TCTCCGTCGTCTCGGATTCTCCAGAAGCGAACGGTACGAAGTTTAGTAAACGGAGAGGATAGCCACCGGAGACAGAGCGGAGAGAA
GCAGCTCGGCGAGAGAGTGAGACGCTGCTGATGTTTCTTCCTCCGGCGAAGGAGACGCAAAAGGGCTTAAAGGGTACGGAGGGTGC
ATGAAGAAGAGAGGGTGTGAGGTGTAAAGACGGCGTTTTGAGTAGACCGGCCATCGGAGAGTTGGGTGAAAGAGTCGGCGGCGAGG
GATAAGGAAGAGAGAGAGAAAGAGAGGGAAACAGTTTTTTTCTCTCCTTCTTGTGTAAATCTCCTGTCTTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850840 molecular chaperone GrpE [Arabidopsis thaliana]13965e-152
NP_568356 molecular chaperone GrpE [Arabidopsis thaliana]13742e-149
XP_002873846 EMB1241 [Arabidopsis lyrata subsp. lyrata]13624e-148
XP_002319738 predicted protein [Populus trichocarpa]9172e-096
XP_002530954 Protein grpE, putative [Ricinus communis]8858e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q114R5 Protein grpE3981e-037
Q3ANN0 Protein grpE3836e-036
Q8DJB3 Protein grpE3801e-035
A2C5L7 Protein grpE3792e-035
A9B9L4 Protein grpE3711e-034

TrEMBL top hits (Blast detail)Scoree value
Q9XQC7 GrpE protein homolog13963e-152
Q94K56 GrpE protein homolog13741e-149
B9I664 GrpE protein homolog9171e-096
B9SY85 GrpE protein homolog8856e-093
B9F116 GrpE protein homolog7413e-076

Arabidopsis top hits (Blast detail)Scoree value
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization13962e-154
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization13746e-152
AT1G36390.1 co-chaperone grpE family protein4992e-050
AT1G36390.2 co-chaperone grpE family protein4992e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  14%
 
72  29%
 
102  29%
 
122  29%

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