Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18168

FASTA Sequence
Unigene ID: UN18168Length: 1420 SSR 
CGACGAAAAAAAAACTATAATCATTTAATCAAACAAGATATTAGCAGGGGTTTGTGGTTATTACATATTGCCAAAGAAAGTATATG
ATAATGACATGTACATTGCTGGGTTTAGCCAGTATAATGACAGTGATAAAACAAGAATTTAAACAACACCACAAGTCCCACTGATA
AACTTCAATGGATCCAGAATGTGTCAAATTACATTAGAAGTTAAATCAACTTCCTAGTGAGAAAAATCAAATCAATACTCTCTCCG
ACCAAACCATGCTTCGAGCCACCATCTCCATTCTCCTCTCCCTGTCTCTAATCATTCAACGTCGTCCTTCTTGGGCTTGCGATAGT
TCTCCTCGATGTGCTTGGCGACGACGAGACTGGTGTTGGTGAGCTTCCTGATGTTGGGAACGTTGTAATTCTGAGCCAAGTAGACT
CCGAAAGCAGTGCCCAACAACAGGGAGACGGAGCTCTTCACTATTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGACA
GCCCCCCTTCGTGTCTACCTGTTCAAAAGAATGGCGGACAAACCAAGCAGAGCACTTGTATTGTACGGAGACGGCTTGGCTCGATC
CGTCGACCCGTCAAATACTCACATCCATTCTCTCGCTTCCGTCGGTACGTGCGGCTTCTTGAGCCTTCCTCATGCGCCTCCAGCAG
AAACAGAGAACGAAAGAGTAGTTCGAGAATTTTCCCATTTGCTTGGTGCATCAGAAGCTTATACTATAGCTAATGGATTAAAAACT
GATTGGCTTAGACGTATTACAACTCAGTGAAATATCCCAAAAGAGTGATGATGATTCCTTTCCTTCTGATGCCACGGCAACTGAAT
TACTGAGGCTGCTTGGCTTCGAAGGAGGAAAGTGCTTAGATGTGAGCCTATACGACTCCGTTTTTGTGCATATAGGTGGTGGTGAT
GATAACGGGGGGATGATCGACTCTTTGATTGGTAGTGTTATGAGAATGGCTCAGCCTGGTTCAGAGATTGTACCTCGCTTGCATCT
CTCGCTTGTTCTTAGCTACGGTTCCGTTACGGACAAGGATGTCTCAGTTTTTTCTGTCAAGGCTCCACGAGAAGGTGTTACCCCGG
CGTTTCAAGGACTAGTCCCGCGTCAGAGCTACACCATGCGAGGTGAAAAGCCACGAGATGATGTTCGGGACTACTGCCCAATGTTG
GTAGCTCAGTGGCAGGATGCAGTGACACGGAAAGACTTGGTTGATACATTATCTTTCGAAGCTCTGAAAAAGCTCTTCCCACTGTT
GAAGTTGAGTGTGGATTAATCCCCTTGGCAAAGACACTTTGACTCTTTTATATCCAGCTCAGAGCTAGTACTTTTAAATCAAAATT
ATCCAATGTGTACACACAATAATAATATTCAAATTTTTGATGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871501 hypothetical protein ARALYDRAFT_488018 [Arabidopsis lyrata subsp. lyrata]6985e-071
NP_196742 uncharacterized protein [Arabidopsis thaliana]6691e-067
XP_002309505 predicted protein [Populus trichocarpa]3061e-025
XP_002279873 PREDICTED: hypothetical protein [Vitis vinifera]2863e-023
XP_002516450 conserved hypothetical protein [Ricinus communis]2747e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LYF0 At5g118106697e-068
B9HDN6 Predicted protein3069e-026
B9RRT1 Putative uncharacterized protein2745e-022
C6TMK9 Putative uncharacterized protein2541e-019
Q8S8K5 Putative uncharacterized protein At2g357362306e-017

Arabidopsis top hits (Blast detail)Scoree value
AT5G11810.1 unknown protein6694e-070
AT2G35736.1 unknown protein2312e-019
AT4G25225.1 unknown protein1722e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  33%
 
92  33%
 
121  17%
 
111  17%

Unigene MembersMember information