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Information for unigene UN18175
| FASTA Sequence |
| Unigene ID: UN18175 | Length: 994 |
SSR | | GAATAAATGGTATGTTGTGCGTTTTTTATGTGAGGACAAAGAGTTAAACTTTACACACGAGTAATCAGTATAGCACACTTGAGGCC
CTATGAGTTGTGTGTTTCTTTACACATTACAAGTGATGAGTACTTTTTTTTTCCCTTTAGTCCTCCGTGTCTTCCTCAAAAAGGAA
CAAGTTAGGAGTTCCTCTGTTCTCTTCTTCTACTCCTGCTTCATTGGCTACACCGATCTCTCTCAAGTTGTTCTTATCTAATCTCT
GCTTATAAACTGCGTCGTAAGCCTCCATGTTTAGCCCCGATGCTAGGAAGAGTTCTAACTCGTGGACAAACCGGTCTGTTCTCGCC
AGTAAGAAAGGACGAGCCGCCTCTGCAATCACCGATTTGAACTGTTCTCGAAAGGCCTCTCCGCTTCTTGTTTCTTGCTTGTGTCT
CTGTTCGGTTCTTTTGCAGAAGGAATCCATTACACCGACCAGATGGTGCAGAACGATATCAACATCTTCCTCCTGCATCAGAGCTT
GAAGCTCCCTTCTCAACCAGGATTCAAGCCACCGATTCCTCTGTAGGAACTTCTTCAGTTTCCAAAACTTAGGAACGTCAAACACA
TCCGCCAAGAAACCTGATTCGGTGTAGTAACATTGCAATCTACACCTCTGTTCCTTTGTTAGGACAAAGCCATCTGTAATATTCGG
ATCAACATAATGCCGGTCAAAAGAGTGCCCGTCGAAGTTGTATATGATTGAGATGTTATCCCTCTTACAGAGAGGACACTTAACAG
AAGACAAAGGCTTTGTGACCTTGCTGGAAACAACTTTGATCCATTGTTTTATACATCTGAAACAAAACTTGTGGAAACATGTATCA
AGATATGATTCTTGGAGTATGGGTCCGAGGCAAATTGGACATGGATCTCCTCCGTCGATTGAACTGCTCCCGACGTCGATCTCCTT
CGCCGCCATACCTCACGTCTCTCTCTCTCCAGCGTTAACCGCCGACCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_187176 RING/U-box domain-containing protein [Arabidopsis thaliana] | 1066 | 6e-114 |
| XP_002882406 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1028 | 2e-109 |
| AAF27031 unknown protein [Arabidopsis thaliana] | 835 | 4e-087 |
| XP_002328433 predicted protein [Populus trichocarpa] | 787 | 1e-081 |
| CBI36756 unnamed protein product [Vitis vinifera] | 763 | 8e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NS56 E3 ubiquitin-protein ligase Topors | 121 | 1e-005 |
| Q80Z37 E3 ubiquitin-protein ligase Topors | 121 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GYA2 At3g05250 | 1066 | 4e-114 |
| Q9MA94 T12H1.22 protein | 835 | 3e-087 |
| B9MZU0 Predicted protein | 787 | 9e-082 |
| B9RF44 Protein binding protein, putative | 762 | 7e-079 |
| C6SXL8 Putative uncharacterized protein | 632 | 9e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G05250.1 zinc finger (C3HC4-type RING finger) family protein | 1066 | 2e-116 |
| AT2G39100.1 zinc finger (C3HC4-type RING finger) family protein | 137 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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