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Information for unigene UN18189

FASTA Sequence
Unigene ID: UN18189Length: 996 SSRSNP
GGAGTACAAAGGGAGATAATGTGATGATGATGATGATGATGATGAATGACCACCATCCCACATAATATTATTACGAATGTTACAGG
TTGAAGAAAAAAGAAGGCAGTAATTAATCTAACATACAACAGAGAGATCACTTTCACTCATGATTTATATCAAACCAGAAGTAGAG
GTAAGCCTTCGAGTACATGACTCGAACACGCTGCAGTACCAAGTCTCCGCTTGTAGCAACAGCCTTTGCACCTCCTTCTATCCTTG
TCTGCAAAACAGTCACACTGTTTCCCTTAATCTTTTCAACAACGGTTTCCTTCACTTCCACATGCCTGCTCAAGTTATCTTCTTCT
TCTCCAGCAGTGCTCACGATTGGGCATGAGAGATGGTCCAAAGGGTTTGTTTCACATTGAAGCACGCATCCATCAATCGTTATCCT
TCCGCTCCTGTGAAGCAAGCAGCAGCCAAGCTCGGCTTTTACTGTTAGATTCGCTAGCTTGCAGGTTGATAGCAACTCCAGGGCAC
TGTCTGATCCTCTAGAACATACAAGGGTGGTTTCATCAGGAATCTCGCCACCACCAATCAGGCAAATAGGCTTTTTAATCTGAATA
TTAGAAACGCGATGACTTCCACCAGCACCTATTAAAATGGTATCACCAGGTCTTGCAGCAGATACAGCAGACTCAATGTCATGGAA
AACTCCAGGGAGTGATAAACCCTTCACAAAAGGGTCGACTCGTAGCCACAAGCGAGGGTGACAGGCCAGATATCTCCATCTGTGGC
AAACGAGTGCTGTGTTATACCTATCAGGAATTGGAGAGAGGAAGCTGAGGATGTGCATGAGGCAACCATCATCGAGATTGTTAAGA
GATGTGAGAAACTCATGTTTCATTCTCTTCTTCTTCTTCATCCTCGGTTCGGTGATTCGCTTGTCGTCAAGCTTTGAGATTTTAGG
AGTCTCCATGGAAGGAAGCAATCAATGAACCCTAAACTCCTCGCCGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877981 skp1-interacting partner 5 [Arabidopsis lyrata subsp. lyrata]12055e-130
NP_566999 F-box protein SKIP5 [Arabidopsis thaliana]11867e-128
AAG21980 SKP1 interacting partner 5 [Arabidopsis thaliana]11572e-124
XP_002269519 PREDICTED: hypothetical protein [Vitis vinifera]8076e-084
XP_002513076 conserved hypothetical protein [Ricinus communis]7924e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q94FT2 F-box protein SKIP511863e-129

TrEMBL top hits (Blast detail)Scoree value
B9RGC4 Putative uncharacterized protein7922e-082
C6TMS4 Putative uncharacterized protein7913e-082
B9GM21 F-box family protein7904e-082
Q940D2 SKIP5-like protein7771e-080
D5A8A6 Putative uncharacterized protein7511e-077

Arabidopsis top hits (Blast detail)Scoree value
AT3G54480.1 SKIP5 (SKP1/ASK-INTERACTING PROTEIN 5)11872e-130
AT3G54480.2 SKIP5 (SKP1/ASK-INTERACTING PROTEIN 5)4032e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  50%
 
212  33%
 
81  17%

Unigene MembersMember information