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Information for unigene UN18214

FASTA Sequence
Unigene ID: UN18214Length: 780  SNP
GGGGTTGTTACTCTTTTCTATCTTTGCGCCTTTGAGGGAGAGAAGAAGATGAAGGCACCGAACATGGAGACGGTAACGAAATATCT
GGAGAATATTTCTCTTAATGATCGGAGAAGAAGAGTCGGAGATAGGCTTGGAAGATCGTCGTCGAGGACAGAAGAGAGAAGCAATG
AACACATACATCCCATCTCAGATAGAACACTGGAGCTTAATTCTCACTTATCTCTTCCTTCTCACTGGGAACAGTGTCTTGATCTC
AAGACCGGTGAGATTTACTACATAAACTGGAAAAATGGAATGAGAGTGAAAGAGGATCCAAGGAAAGTGATGATGAAGGCAGATAA
TGACAGTGCAGAATCATATGGAACCTTGTGCTCAGAAGAAGATAGCTCGTATTACGATAGTGAGGAGTCTTCATCAGCATCATCTC
CATCATCAAGAGAGAATCAAAAAGAGGATGAGGATGAAGATGATGAAGACGAAGAAGAGGAAGATGAAGAAGAAGATGTGCTTGTG
GTTGCTGGATGCAAAGCTTGTTTCATGTACTTCATGGTCCCTAAGCTTGTCGAGGACTGTCCCAAATGTGCTGCACAGCTTCTTCA
CTTTGATCGACCTCATTATGCTTCTTCTTAAAACATCTCTCTTTGTTTCCACGTCTTTCTTTCGTTTTTTTTCTTATGAGAATTTA
TTTTGGTTTCCTATTTTTTTCTTTAATCTTATATTTGTCATAATTTAGTGATTTCTCTTTCAAGTGGGTATCTAACAACAAGTTTC
AATGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180909 uncharacterized protein [Arabidopsis thaliana]7994e-083
AAO42247 unknown protein [Arabidopsis thaliana]7922e-082
AAB80668 hypothetical protein [Arabidopsis thaliana]7725e-080
XP_002879456 hypothetical protein ARALYDRAFT_902425 [Arabidopsis lyrata subsp. lyrata]7582e-078
NP_001189667 uncharacterized protein [Arabidopsis thaliana]6103e-061

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q5HZ54 At2g335107992e-083
Q84W47 Putative uncharacterized protein At2g335107922e-082
O22801 Putative uncharacterized protein At2g335107723e-080
C6TL16 Putative uncharacterized protein4543e-043
Q7XBE3 Humj14166e-039

Arabidopsis top hits (Blast detail)Scoree value
AT2G33510.1 protein binding8001e-085
AT1G28070.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT2G33510.1); Has 40 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3762e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
117  54%
 
62  15%
 
122  15%
 
72  15%

Unigene MembersMember information