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Information for unigene UN18219

FASTA Sequence
Unigene ID: UN18219Length: 1517 SSR 
CTACCAGTAATAACGAGACCGTCTCTGCCTCTCTCTCTCTCCCTTAAAAAAAATAATGGACAGTGTAGCACTTTTCTTCACCGGAG
CTCTCGTAGCCGGCGGTATCTACTGGTTCCTCTGCGTACTTGGACCAGCCGAGCGTAAAGGCAAACGAGCCTTGGATCTATCAGGC
GGCTCCATCTCCGCTGAGAAAGTTCAAGACAACTACAAACAGTACTGGTCTTTCTTCCGCCGTCCCAAAGAGATCGAAACCGCCGA
GAAAGTCCCCGATTTTGTCGACACGTTCTACAACCTCGTCACCGACATCTACGAGTGGGGATGGGGACAGTCCTTCCACTTCTCCC
CTTCCATCCGTGGCAAATCCCACCGTGACGCCACGCGCCTCCACGAAGAGATGGCCGTAGATCTGATCCAAGTGAAACCGGGCCAA
AAGATCCTCGACGTCGGATGCGGCGTAGGAGGTCCGATGCGCGCGATTGCATCTCACTCGCGAGCCAACGTCGTGGGGATCACGAT
CAACGAGTATCAAGTCAAGAGAGCGCGTGACCACAACAGGAAAGCGGGACTCGACGCGCTCTGCGAGGTCGTGTGCGGCAACTTCC
TCCAGATGCCGTTCGATGACAACACATTCGACGGCGCGTACTCGATCGAAGCGACGTGTCACGCGCCGAAGCTTGAAGAAGTCTAC
GCGGAGATCTACAGAGTGTTGAAGCCCGGATCTCTCTACGTGTCGTACGAGTGGGTCACGACCGATAAGTTCAACGCGGAGAATGA
GGAACACGTGGAGGTCATCCAAGGGATCGAGAGAGGAGACGCGCTTCCTGGGCTTAGGGCTTATTCCGACATAGCCGAGACAGCGA
AGAAGGTTGGGTTCGAAGTTGTCAAGGAGAAGGATCTGGCGGCTCCGCCTGCTGAGCCGTGGTGGACTAGGCTTAAGATGGGTCGG
CTCGCTTACTGGAGGAACCACATTGTGGTTCAGGTTTTGTCTGCTGTCGGAGTTGCGCCTAAAGGAACCGTTGATGTTCACGAGAT
GTTGTTTAAGACCGCTGATTTCTTGTCCAGAGGAGGCGAAACTGAAATTTTCTCTCCGATGCATATGATTCTCTGCCGGAAACCTA
TTTCTTAATAGGAGTATCTGTCGATCTCAGTTTGTTTTAATTTTTGTTTTTTTATGGGCTTTTTAATCATGCTTGGTCAGTCCTAT
GTACTCTTTTTAGATTTAAAACCGTGTTTCTTAATTTGGTATTACTGTTAAGTTTTTCCTGAATAAGTGAATCTTGGAATCGAATT
ATCCGCCGGAAACTTAGCGCCGACAGACACCGTGGATTATAAGTAAGTAGTGTAGTAGAAGAACTGATTACTGTAAGAAGGAAGGG
CACTTTAGTAAACTAATGTACTTTGTAGTTATGTGTGGACAGCGTGTAATAGTAGTTGATTAGTGTGAGTCAGTGTCTGATTTTTG
TGTGTAAATTAATTTATCTTGATTAAAGAATAGAAGTGTGCGTGGCGCGACAAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173458 24-methylenesterol C-methyltransferase 2 [Arabidopsis thaliana]17882e-197
AAM91592 24-sterol C-methyltransferase [Arabidopsis thaliana]17855e-197
XP_002893098 hypothetical protein ARALYDRAFT_472261 [Arabidopsis lyrata subsp. lyrata]17846e-197
CAA61966 sterol-C-methyltransferase [Arabidopsis thaliana]17838e-197
AAN31890 putative sterol-C-methyltransferase [Arabidopsis thaliana]17802e-196

Swiss-Prot top hits (Blast detail)Scoree value
Q39227 24-methylenesterol C-methyltransferase 217889e-199
Q94JS4 24-methylenesterol C-methyltransferase 316346e-181
O82427 24-methylenesterol C-methyltransferase 213765e-151
Q6ZIX2 Cycloartenol-C-24-methyltransferase 16051e-061
Q9LM02 Cycloartenol-C-24-methyltransferase6032e-061

TrEMBL top hits (Blast detail)Scoree value
B9R8F7 S-adenosyl-l-methionine:delta24-sterol-C-methyltransferase, putative16941e-186
B0FDL8 24-sterol C-methyltransferase16814e-185
D2D5G3 Sterol 24-C methyltransferase 2-116771e-184
B0FDL7 24-sterol C-methyltransferase16752e-184
A9P9Q4 Predicted protein16742e-184

Arabidopsis top hits (Blast detail)Scoree value
AT1G20330.1 SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase17888e-200
AT1G76090.1 SMT3 (STEROL METHYLTRANSFERASE 3); S-adenosylmethionine-dependent methyltransferase/ sterol 24-C-methyltransferase16346e-182
AT5G13710.1 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6032e-062
AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6032e-062
AT1G73600.2 methyltransferase/ phosphoethanolamine N-methyltransferase1812e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  38%
 
68  62%

Unigene MembersMember information