RadishBase

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Information for unigene UN18226

FASTA Sequence

Unigene ID: UN18226	Length: 960	SSR
ACCGGTAAACACCAAAACCAGGTGGTGGATATATTTTTATTCAGGAACGTAACAGAGTTTTAGCAGACGACACACAAACTGAACAA ACATCTTATTTAGTAAATCAAATACTAAGTCTTCTCTCTACTTTGATAAGATCACATATTTTATTATTATGGTTACTTTTTAGCTG TGATCTATTCTTGACCATCAGCATCCCTCTCTCTCTCTCCTCATTCCAGTTCCTTCAAAAAATCTTCGTTGTCTACCAAAACTGTT TTCCAGCCATCAGGATCGAGGAACGAGACAATCTTGGTGCCTAGTCCAGGAAGAGGTCCGGCTTCTCTAGTGATCTTTCCTCCTAG CTCTTGGTTCATTATCTTCACAACTTCTCAAGAGTCTCATCCCTAGGACCTTCTCATAGAACTTGATGGCGCGGTCAAGATCACCA ACGCGAAGCATGACTTGACAGAGTGGTTCAGGAGTAGGACCTCTCTGGATGAGCTCAAAAGTGTAACCATCAGGGTCCTTCACAAA GGCAATGACACTGTTTCCACCTTTGACAGGACCTGGCTCTCTGGTGACATTTCCACCCTTGGCACGGACAGTCTCAACCATCTTGG CAACATCTTGAGTGGAAATAGCGAAATGCCCAAATCCAGTCCCAATTTCATAGGAGCTAACACCATAATTGTATGTGAGCTCGACG ACGAAGTTGGAGGTCTCAGGACCAAAACCAAGGAAAGCATTAGAATACTTCTCCTCAGGGACATCTCTTTTCCTCAACACCTTCAT CCCAAAGCACTCAGTGTAAAACTGGATAGTGCGATCAAGATCACCAACGCGGTAGACAACATGGAGAAAACGACGCTTATCCTTCT TTGGCCATTCCAACAACTCTGCCTTCTCTGCCATTTTTTTCTGATCGAAGATGAAGCAGATACACAGACACCTAGGACAGACACCA CTGGACACGGATCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
Q39366 RecName: Full=Putative lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase	882	1e-092
BAF81517 putative lactoylglutathione lyase [Brassica rapa]	876	6e-092
BAJ33831 unnamed protein product [Thellungiella halophila]	875	8e-092
XP_002889897 hypothetical protein ARALYDRAFT_888497 [Arabidopsis lyrata subsp. lyrata]	871	2e-091
NP_001184968 lactoylglutathione lyase-like protein [Arabidopsis thaliana]	864	1e-090

Swiss-Prot top hits (Blast detail)	Score	e value
Q39366 Putative lactoylglutathione lyase	882	5e-094
Q8W593 Probable lactoylglutathione lyase, chloroplast	741	1e-077
Q948T6 Lactoylglutathione lyase	720	3e-075
P0AC82 Lactoylglutathione lyase	410	3e-039
P0AC81 Lactoylglutathione lyase	410	3e-039

TrEMBL top hits (Blast detail)	Score	e value
A8CF50 Putative lactoylglutathione lyase	876	4e-092
O65398 AT1G11840 protein	862	2e-090
Q27GN4 AT1G11840 protein	862	2e-090
Q940A4 Putative lactoylglutathione lyase	854	1e-089
B9DGT0 AT1G11840 protein	853	2e-089

Arabidopsis top hits (Blast detail)	Score	e value
AT1G11840.2 ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding	862	1e-092
AT1G11840.3 ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding	862	1e-092
AT1G11840.1 ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding	862	1e-092
AT1G11840.4 ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding	862	1e-092
AT1G11840.5 ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding	862	1e-092

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	3			100%

Unigene Members	Member information