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Information for unigene UN18233

FASTA Sequence
Unigene ID: UN18233Length: 929 SSRSNP
CTATCAAACCTCAAATCCATTTATTAGTGTGACAAAATACAACAAAAAGCTGAAGCACAAGTGTTTGTAATGCTTATTCCTCTTGA
CAAGAAAACCAAAAAGAGAAGTGTACGTAGAAACCCCAAAAACATGATCTAATGAGAAGGAACCATAAGTCCTAGAGACTTGTTGA
GCCATGCCTTCCATTTCCCAGAGGTCTTCCTGATTGTTGTTGTTGATGTGTCCACAGAACCTCCAAGATTTTGTGCTTCTAACTTC
TTAGACAGAACAAAGTTCCTGGACCCGGTTGAACCAATCTTTCCCCATGGATTGAATGCTTCAACTGCATAGTAAGGAGAGTAGAG
GAGGAAAAAGCTAGAATCAGAACCGAGTAGTGGAAGCCTGCCTTCACGAGCATAGCATTTGAGAGCATAGTCAATGACATTTGAAA
CAGTTTCATCTTCTTTGACAACAAAACGAATGGGTCCAGCACTTCCTAAGAAACTGATGCTAACGAGGAACCTGTTAATCTTGGAC
TTGTGTGTTTTCTTCTGCTTGTTGTTGTTGTACAGCAACATCTTTAACAATAAACGCCAAAAAAAGAAAATAAGACTTTTGATGGG
AGTTTGGGTTGCTTCAAGGGTCGACACCGATGCAACGGAAGTACCAGGATTCCTTGCAAGAGCCAAAAGTGAAGGAGGAGGAGGAG
GAGAGAGGGAGGAGAAAGCTCGCCCTTGCGGTGGTGCAATGGGAGAGCATAAATTCTCTGGTTGTCGGAGTTGTTTCTACCATTCA
AGACGCTGCTTCAGAGAGAGAGAGAGAGAGGGATCGATGAAATGAGATGGTGAAGGATGTATGTGAATAAGAAAAGACAGAGTCTC
TGATGGTGAAGATAGGTTTCAGAATCTAAAAGAAAGAAAGAGAGAGTTTTGAGATGGAGGCCGAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875078 hypothetical protein ARALYDRAFT_322499 [Arabidopsis lyrata subsp. lyrata]5576e-055
XP_002875080 hypothetical protein ARALYDRAFT_904355 [Arabidopsis lyrata subsp. lyrata]4832e-046
XP_002868302 predicted protein [Arabidopsis lyrata subsp. lyrata]3685e-033
XP_002888795 hypothetical protein ARALYDRAFT_894896 [Arabidopsis lyrata subsp. lyrata]3668e-033
BAJ34604 unnamed protein product [Thellungiella halophila]3651e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9S812 At1g707803513e-031
B9SP78 Putative uncharacterized protein3414e-030
B9HJD1 Predicted protein (Fragment)3381e-029
B9T712 Putative uncharacterized protein3381e-029
C6SWM8 Putative uncharacterized protein3381e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G70780.1 unknown protein3521e-033
AT1G23150.1 unknown protein3153e-029
AT2G01554.1 unknown protein2222e-018
AT5G37730.1 unknown protein2051e-016
AT1G70782.1 CPuORF28 (Conserved peptide upstream open reading frame 28)1612e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  40%
 
72  20%
 
62  20%
 
112  20%

Unigene MembersMember information