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Information for unigene UN18258
| FASTA Sequence |
| Unigene ID: UN18258 | Length: 1171 |
SSR | SNP | GCAGAAATGAAACTTCAATCATTTAGACTAATGGACCAGCAACCATTTGCACGAAATTCTTTTACATTTTGGCGAGATTTTATCAT
CAATGGTTTTACAAGAGACCAGACTTTATATTGGTCACATATATAGCACATATAGCTTGAGTTTTTACATGTCTTTGTTTCTCTCT
TAGACACTTGATTGATGAATAATTTATAGCCATAACATTATGACTAGAATCTTACAACGATACAGGAGATGTCATCTTTGCTTTTC
CTAGAGATTGCTTCTTCTATCAACTCCTTGGCTGCCTCATGGGGATCTTTTATGCTTCTGATCGCGTCCACAGCTTCTTGGTTTGA
CATCACCTTCCAAATTCCATCACTGGCAAAAACAATGAACTCGGTCTCATCATGGATTGTCTGGTGTGTTATGTCTGGTTCCGAGC
TCAGATGTATCTTTAAGCTCTTATCTCCAAACGCCCTCGCAACCGCTAGTTGTCCATCAACTCTTGGAACGTCCCCTGGAATATTG
GATACAAAGCCGCCACGGCTCTCTATTTCCTTCTGCTCCTTGCTTGGTTCATGATCAACAGAGAGCTGAGATGCAACACCATTCTT
TGACATGACTGCCCGTGAGTCTCCAACGTTAGCAACTATTAGCTTTTGCCCATCTATCAGAATTCCAGTTACAGCAGTTGATCCAC
CTTTGCCAAGTTTAAGTGACTGCTCTAATATGGAAGCATCTGTTGATATGTATGCATCCCTTATAGCCTTCTCCATATCAGTCCAA
AAATCCTTCTCTTTGAGTATGTTGTCAAAGAGGTTGGTCTGCAAGTACTTGGCCACGTCATGTCCCAAGTGACCGTCAAAAATGGC
AAACAAACCCAAATCGTGGTTGTCTACTTTTTTGAACTCAGACACAACGTAGTCCTCCATGGGATGGTTAGCTTTGCCCTTGACAA
AGTGAAAACCGTGGGAGATGTTTTTCCATGTCCTGCTTTTACCTCTGCCCGTTTCAGATCCGCAGAATCCAGCCTTCAACTTCATC
TTGTGCAGAATTTCTCTGCCTGTCATTGTTGTGAGAATGAGAGTTGAGTGTTTGTGTATGAAATGTGAAATGTGAAATGATTCAGA
AGAAAGAGAGAGAGAGAGATGTGTTTATTTAGGCGACGTGAACAGGCCGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33913 unnamed protein product [Thellungiella halophila] | 1349 | 1e-146 |
| XP_002886294 hypothetical protein ARALYDRAFT_900426 [Arabidopsis lyrata subsp. lyrata] | 1281 | 9e-139 |
| NP_567808 putative protein phosphatase 2C 58 [Arabidopsis thaliana] | 1271 | 1e-137 |
| NP_565480 putative protein phosphatase 2C 20 [Arabidopsis thaliana] | 1241 | 4e-134 |
| BAD43676 putative protein phosphatase 2C [Arabidopsis thaliana] | 1234 | 3e-133 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93YW5 Probable protein phosphatase 2C 58 | 1271 | 6e-139 |
| Q9SIU8 Probable protein phosphatase 2C 20 | 1227 | 7e-134 |
| Q0D673 Probable protein phosphatase 2C 62 | 946 | 3e-101 |
| Q9LDA7 Probable protein phosphatase 2C 39 | 940 | 1e-100 |
| Q0JAA0 Probable protein phosphatase 2C 44 | 858 | 4e-091 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MYF6 Predicted protein | 1119 | 4e-120 |
| B9RVV7 Protein phosphatase 2c, putative | 1110 | 4e-119 |
| A5BP39 Putative uncharacterized protein | 1033 | 4e-110 |
| A5C319 Putative uncharacterized protein | 1013 | 7e-108 |
| A9PCG7 Predicted protein | 1004 | 8e-107 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G28400.1 protein phosphatase 2C, putative / PP2C, putative | 1271 | 5e-140 |
| AT2G20630.1 protein phosphatase 2C, putative / PP2C, putative | 1241 | 1e-136 |
| AT2G20630.2 protein phosphatase 2C, putative / PP2C, putative | 1227 | 6e-135 |
| AT3G15260.1 protein phosphatase 2C, putative / PP2C, putative | 940 | 1e-101 |
| AT3G15260.2 protein phosphatase 2C, putative / PP2C, putative | 940 | 1e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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